RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 A6NJY4 79 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 C15orf62A8K5M9 175 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 MGST2Q99735 147 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 OSTCQ9NRP0 149 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 ZNF256Q9Y2P7 627 aaPredicted RBP11.21□□□□□ -0.61
CDH1-201ENST00000261769 C15orf65H3BRN8 121 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 FOXL1Q12952 345 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 RCHY1Q96PM5 261 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 PLCE1Q9P212 2302 aa11.21□□□□□ -0.62
CDH1-201ENST00000261769 H3BRM9 83 aa11.21□□□□□ -0.62
CDH1-201ENST00000261769 FOXA3P55318 350 aaPredicted RBP11.21□□□□□ -0.62
CDH1-201ENST00000261769 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.62
CDH1-201ENST00000261769 TMEM50AO95807 157 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 FOLR2P14207 255 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 PPBPP02775 128 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 DEFB131AP59861 70 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 CTSZQ9UBR2 303 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 H3BUA1 57 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 CRPP02741 224 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 OR4C5Q8NGB2 326 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 TGIF2-C20orf24A0A0A6YYL0 155 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 A6NDN8 102 aa11.2□□□□□ -0.62
CDH1-201ENST00000261769 NPIPB5A8MRT5 1133 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.19□□□□□ -0.62
CDH1-201ENST00000261769 CBLN1P23435 193 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 ARFGEF3Q5TH69 2177 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
CDH1-201ENST00000261769 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
CDH1-201ENST00000261769 CNTFRP26992 372 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 PDE6HQ13956 83 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 SCGB3A1Q96QR1 104 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 COL4A4P53420 1690 aaPredicted RBP11.19□□□□□ -0.62
CDH1-201ENST00000261769 COX6CP09669 75 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 PSG3Q16557 428 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 VGLL1Q99990 258 aa11.19□□□□□ -0.62
CDH1-201ENST00000261769 A0A087WX48 190 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 NDUFA4O00483 81 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 COTL1Q14019 142 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 WFDC1Q9HC57 220 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 TRGV1A0A0A0MS02 117 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 MMP23AO75900 390 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 TCRAP04437 139 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 RAB37Q96AX2 223 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 NAV2Q8IVL1 2488 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
CDH1-201ENST00000261769 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 CFAP161Q6P656 301 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 Q8NFD4 153 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 TSSC4Q9Y5U2 329 aaPredicted RBP11.18□□□□□ -0.62
CDH1-201ENST00000261769 MYO18BQ8IUG5 2567 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 MST1LQ2TV78 715 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 Q6ZRM9 215 aa11.18□□□□□ -0.62
CDH1-201ENST00000261769 MRPS16Q9Y3D3 137 aaKnown RBP11.18□□□□□ -0.62
CDH1-201ENST00000261769 CCDC168Q8NDH2 2452 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 C11orf53Q8IXP5 236 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
CDH1-201ENST00000261769 LHBP01229 141 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 RPL23P62829 140 aaKnown RBP11.17□□□□□ -0.62
CDH1-201ENST00000261769 RPL36AP83881 106 aaKnown RBP11.17□□□□□ -0.62
CDH1-201ENST00000261769 RPL36ALQ969Q0 106 aaKnown RBP11.17□□□□□ -0.62
CDH1-201ENST00000261769 UBE2E2Q96LR5 201 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 A0A0G2JRQ6 117 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 MRPL27Q9P0M9 148 aaKnown RBP11.17□□□□□ -0.62
CDH1-201ENST00000261769 EP400Q96L91 3159 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
CDH1-201ENST00000261769 IFI27P40305 119 aaPredicted RBP11.17□□□□□ -0.62
CDH1-201ENST00000261769 TRAV12-3A0A0B4J271 114 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 H3BVH4 76 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 RNASE7Q9H1E1 156 aaKnown RBP11.16□□□□□ -0.62
CDH1-201ENST00000261769 ANAPC10Q9UM13 185 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
CDH1-201ENST00000261769 APOC4P55056 127 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 NRGNQ92686 78 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 PAM16Q9Y3D7 125 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 GTF2H5Q6ZYL4 71 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 ERASQ7Z444 233 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 OR11H2Q8NH07 326 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
CDH1-201ENST00000261769 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 PRO1933Q9H354 126 aa11.15□□□□□ -0.62
CDH1-201ENST00000261769 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms