RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 HNRNPCP07910 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
DDX39A-201ENST00000242776 CTSGP08311 255 aa10.1□□□□□ -0.79
DDX39A-201ENST00000242776 SELENOTP62341 195 aa10.1□□□□□ -0.79
DDX39A-201ENST00000242776 ZNF600Q6ZNG1 722 aa10.1□□□□□ -0.79
DDX39A-201ENST00000242776 TMUB2Q71RG4 321 aa10.1□□□□□ -0.79
DDX39A-201ENST00000242776 WDR61Q9GZS3 305 aaKnown RBP10.1□□□□□ -0.79
DDX39A-201ENST00000242776 C17orf112F2Z3M2 114 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 CFDP00746 253 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-201ENST00000242776 ELLP55199 621 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-201ENST00000242776 YPEL3P61236 119 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-201ENST00000242776 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
DDX39A-201ENST00000242776 LGALSLQ3ZCW2 172 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-201ENST00000242776 TIGITQ495A1 244 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 CYP2G1PQ6ZSU1 146 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 BPIFCQ8NFQ6 507 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 CHRDL1Q9BU40 450 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 WFDC1Q9HC57 220 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
DDX39A-201ENST00000242776 IGKV1D-37A0A075B6S9 117 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 M0R2N4 97 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 NDUFA4O00483 81 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 AGPAT2O15120 278 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 TOMM40O96008 361 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 IGKV1-17P01599 117 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 CAMLGP49069 296 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 C9orf62Q8N4C0 152 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 GBGT1Q8N5D6 347 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 Q8WTZ3 238 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 MGST2Q99735 147 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 KRTAP4-5Q9BYR2 181 aa10.08□□□□□ -0.8
DDX39A-201ENST00000242776 DAZ1Q9NQZ3 744 aaKnown RBP10.08□□□□□ -0.8
DDX39A-201ENST00000242776 A0A1B0GVY2 172 aa10.07□□□□□ -0.8
DDX39A-201ENST00000242776 BOLA2-SMG1P6H3BVE0 249 aa10.07□□□□□ -0.8
DDX39A-201ENST00000242776 CA1P00915 261 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-201ENST00000242776 RD3LP0DJH9 198 aa10.07□□□□□ -0.8
DDX39A-201ENST00000242776 ADMP35318 185 aa10.07□□□□□ -0.8
DDX39A-201ENST00000242776 NKX2-5P52952 324 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-201ENST00000242776 OR51G1Q8NGK1 321 aa10.07□□□□□ -0.8
DDX39A-201ENST00000242776 ZNF471Q9BX82 626 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-201ENST00000242776 NPCDR1Q9BY65 106 aa10.07□□□□□ -0.8
DDX39A-201ENST00000242776 DYNC1H1Q14204 4646 aaKnown RBP10.07□□□□□ -0.8
DDX39A-201ENST00000242776 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 YIF1AO95070 293 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 ZNF90Q03938 601 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 OPCMLQ14982 345 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 RPL7L1Q6DKI1 246 aaKnown RBP10.06□□□□□ -0.8
DDX39A-201ENST00000242776 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 RNF2Q99496 336 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 GINS3Q9BRX5 216 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 C11orf68Q9H3H3 251 aaKnown RBP10.06□□□□□ -0.8
DDX39A-201ENST00000242776 TIMM9Q9Y5J7 89 aa10.06□□□□□ -0.8
DDX39A-201ENST00000242776 PUS1Q9Y606 427 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDX39A-201ENST00000242776 DNAH17Q9UFH2 4485 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 IL4P05112 153 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 PSG1P11464 419 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
DDX39A-201ENST00000242776 S100A7P31151 101 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 RPL29P47914 159 aaKnown RBP10.05□□□□□ -0.8
DDX39A-201ENST00000242776 B2MP61769 119 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 PXDC1Q5TGL8 231 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 HSD17B11Q8NBQ5 300 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 GNPNAT1Q96EK6 184 aaPredicted RBP10.05□□□□□ -0.8
DDX39A-201ENST00000242776 SLC45A2Q9UMX9 530 aa10.05□□□□□ -0.8
DDX39A-201ENST00000242776 LINC00869P0C866 280 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 Q6ZRG5 221 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 RNF125Q96EQ8 232 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-201ENST00000242776 RSG1Q9BU20 258 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 CYTL1Q9NRR1 136 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 PXMP4Q9Y6I8 212 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 AGRNO00468 2067 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 ATP6V0CP27449 155 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 TCTAP57738 103 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 LYZP61626 148 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 MIC13Q5XKP0 118 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 OR1L4Q8NGR5 311 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 NARS2Q96I59 477 aaKnown RBP10.04□□□□□ -0.8
DDX39A-201ENST00000242776 PBDC1Q9BVG4 233 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 ZFAND3Q9H8U3 227 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 SLC39A9Q9NUM3 307 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 PFDN2Q9UHV9 154 aa10.04□□□□□ -0.8
DDX39A-201ENST00000242776 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-201ENST00000242776 HLA-DMBP28068 263 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 PLP1P60201 277 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 Q6ZTC4 211 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 ZNF767PQ75MW2 155 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 BAP18Q8IXM2 172 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 METTL26Q96S19 204 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms