RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 EXOC6BQ9Y2D4 811 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 AKAP11Q9UKA4 1901 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 FAM155AB1AL88 458 aaPredicted RBP15.09■□□□□ 0.01
CBWD3-208ENST00000612050 IGSF3O75054 1194 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 RAB11FIP3O75154 756 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 NBPF12Q5TAG4 269 aaPredicted RBP15.09■□□□□ 0.01
CBWD3-208ENST00000612050 MOB2Q70IA6 237 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 KIF1BPQ96EK5 621 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 USP40Q9NVE5 1235 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 HMG20BQ9P0W2 317 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 CSADQ9Y600 493 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 MYH2Q9UKX2 1941 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 LBX1P52954 281 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 MAP3K11Q16584 847 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 APOBEC3HQ6NTF7 200 aaKnown RBP15.09■□□□□ 0.01
CBWD3-208ENST00000612050 AACSQ86V21 672 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 TNS4Q8IZW8 715 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 SAGE1Q9NXZ1 904 aa15.09■□□□□ 0.01
CBWD3-208ENST00000612050 MAP4K4O95819 1239 aaPredicted RBP15.08■□□□□ 0
CBWD3-208ENST00000612050 IFIT2P09913 472 aaKnown RBP15.08■□□□□ 0
CBWD3-208ENST00000612050 CACNB3P54284 484 aa15.08■□□□□ 0
CBWD3-208ENST00000612050 FAM151AQ8WW52 585 aa15.08■□□□□ 0
CBWD3-208ENST00000612050 ZNF512BQ96KM6 892 aaPredicted RBP15.08■□□□□ 0
CBWD3-208ENST00000612050 TMEM39BQ9GZU3 492 aa15.08■□□□□ 0
CBWD3-208ENST00000612050 APBB1O00213 710 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 BAG3O95817 575 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 ZBTB48P10074 688 aaPredicted RBP15.07■□□□□ 0
CBWD3-208ENST00000612050 HSPA8P11142 646 aaKnown RBP15.07■□□□□ 0
CBWD3-208ENST00000612050 INHBEP58166 350 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 LDLRAD1Q5T700 205 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 CDC42EP5Q6NZY7 148 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 ZSCAN29Q8IWY8 852 aaPredicted RBP15.07■□□□□ 0
CBWD3-208ENST00000612050 RHPN1Q8TCX5 695 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 CCDC8Q9H0W5 538 aaPredicted RBP15.07■□□□□ 0
CBWD3-208ENST00000612050 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
CBWD3-208ENST00000612050 MROH7-TTC4A0A0A0MT08 1334 aa15.07■□□□□ 0
CBWD3-208ENST00000612050 RPAP1Q9BWH6 1393 aaPredicted RBP15.07■□□□□ 0
CBWD3-208ENST00000612050 MANSC4A6NHS7 340 aaPredicted RBP15.06■□□□□ 0
CBWD3-208ENST00000612050 PLCG2P16885 1265 aa15.06■□□□□ 0
CBWD3-208ENST00000612050 MCAMP43121 646 aa15.06■□□□□ 0
CBWD3-208ENST00000612050 MECOMQ03112 1051 aa15.06■□□□□ 0
CBWD3-208ENST00000612050 TCP10Q12799 353 aa15.06■□□□□ 0
CBWD3-208ENST00000612050 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
CBWD3-208ENST00000612050 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
CBWD3-208ENST00000612050 BCL11AQ9H165 835 aa15.06■□□□□ 0
CBWD3-208ENST00000612050 GAKO14976 1311 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 AOX1Q06278 1338 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 USP2O75604 605 aaPredicted RBP15.05■□□□□ -0
CBWD3-208ENST00000612050 ALDH1A1P00352 501 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 BTDP43251 543 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 MAP3K9P80192 1104 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 MKRN3Q13064 507 aaKnown RBP15.05■□□□□ -0
CBWD3-208ENST00000612050 COL13A1Q5TAT6 717 aaPredicted RBP15.05■□□□□ -0
CBWD3-208ENST00000612050 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ -0
CBWD3-208ENST00000612050 ZNF341Q9BYN7 854 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 IL1RAPL2Q9NP60 686 aa15.05■□□□□ -0
CBWD3-208ENST00000612050 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
CBWD3-208ENST00000612050 DBNLQ9UJU6 430 aaKnown RBP15.05■□□□□ -0
CBWD3-208ENST00000612050 ENTPD3O75355 529 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
CBWD3-208ENST00000612050 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
CBWD3-208ENST00000612050 TTF1Q15361 905 aaPredicted RBP15.04■□□□□ -0
CBWD3-208ENST00000612050 SPRYD7Q5W111 196 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 TMED8Q6PL24 325 aaPredicted RBP15.04■□□□□ -0
CBWD3-208ENST00000612050 CERS3Q8IU89 383 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 EAF2Q96CJ1 260 aaPredicted RBP15.04■□□□□ -0
CBWD3-208ENST00000612050 TEPSINQ96N21 525 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 CSRNP1Q96S65 589 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 SNRKQ9NRH2 765 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.04■□□□□ -0
CBWD3-208ENST00000612050 MAST2Q6P0Q8 1798 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 SSC5DA1L4H1 1573 aa15.04■□□□□ -0
CBWD3-208ENST00000612050 TRPA1O75762 1119 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 C20orf194Q5TEA3 1177 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 PI16Q6UXB8 463 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 TBC1D9Q6ZT07 1266 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 NSUN4Q96CB9 384 aaKnown RBP15.03■□□□□ -0
CBWD3-208ENST00000612050 WNK4Q96J92 1243 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 WRNIP1Q96S55 665 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 IDI2Q9BXS1 227 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 LRRCC1Q9C099 1032 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 FZD1Q9UP38 647 aa15.03■□□□□ -0
CBWD3-208ENST00000612050 GPR75-ASB3A0A0A6YYF3 556 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 RGS3P49796 1198 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 MAP3K12Q12852 859 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 PICALMQ13492 652 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 ZIC5Q96T25 663 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 ELP3Q9H9T3 547 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 RNF186Q9NXI6 227 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 TSKSQ9UJT2 592 aa15.02■□□□□ -0
CBWD3-208ENST00000612050 IDH1O75874 414 aaKnown RBP15.01□□□□□ -0.01
CBWD3-208ENST00000612050 ZAP70P43403 619 aa15.01□□□□□ -0.01
CBWD3-208ENST00000612050 TM4SF4P48230 202 aa15.01□□□□□ -0.01
CBWD3-208ENST00000612050 OPTNQ96CV9 577 aa15.01□□□□□ -0.01
CBWD3-208ENST00000612050 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
CBWD3-208ENST00000612050 CLMNQ96JQ2 1002 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms