RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ZKSCAN4Q969J2 545 aaPredicted RBP26.44■■□□□ 1.82
PNKP-212ENST00000599454 ZNF333Q96JL9 665 aa26.44■■□□□ 1.82
PNKP-212ENST00000599454 MYH2Q9UKX2 1941 aa26.43■■□□□ 1.82
PNKP-212ENST00000599454 IRF6O14896 467 aa26.43■■□□□ 1.82
PNKP-212ENST00000599454 PPATQ06203 517 aa26.43■■□□□ 1.82
PNKP-212ENST00000599454 KIF22Q14807 665 aa26.43■■□□□ 1.82
PNKP-212ENST00000599454 SLC9C1Q4G0N8 1177 aa26.43■■□□□ 1.82
PNKP-212ENST00000599454 FAM151AQ8WW52 585 aa26.43■■□□□ 1.82
PNKP-212ENST00000599454 ZSWIM8A7E2V4 1837 aa26.42■■□□□ 1.82
PNKP-212ENST00000599454 BTBD19C9JJ37 291 aa26.42■■□□□ 1.82
PNKP-212ENST00000599454 CIAO1O76071 339 aa26.42■■□□□ 1.82
PNKP-212ENST00000599454 GNRH1P01148 92 aa26.42■■□□□ 1.82
PNKP-212ENST00000599454 ATG9AQ7Z3C6 839 aa26.42■■□□□ 1.82
PNKP-212ENST00000599454 GNL3LQ9NVN8 582 aaKnown RBP26.42■■□□□ 1.82
PNKP-212ENST00000599454 PTCH2Q9Y6C5 1203 aa26.42■■□□□ 1.82
PNKP-212ENST00000599454 EN2P19622 333 aaPredicted RBP26.41■■□□□ 1.82
PNKP-212ENST00000599454 HDAC5Q9UQL6 1122 aa26.41■■□□□ 1.82
PNKP-212ENST00000599454 DOCK2Q92608 1830 aa26.4■■□□□ 1.82
PNKP-212ENST00000599454 UBTFL1P0CB47 393 aaPredicted RBP26.4■■□□□ 1.82
PNKP-212ENST00000599454 LACTBP83111 547 aaPredicted RBP26.4■■□□□ 1.82
PNKP-212ENST00000599454 SMC4Q9NTJ3 1288 aa26.4■■□□□ 1.82
PNKP-212ENST00000599454 DAGLAQ9Y4D2 1042 aa26.4■■□□□ 1.82
PNKP-212ENST00000599454 CENPFP49454 3210 aa26.4■■□□□ 1.82
PNKP-212ENST00000599454 SEMA3EO15041 775 aa26.39■■□□□ 1.82
PNKP-212ENST00000599454 PRMT2P55345 433 aa26.39■■□□□ 1.82
PNKP-212ENST00000599454 ATP2B3Q16720 1220 aa26.39■■□□□ 1.82
PNKP-212ENST00000599454 CEP126Q9P2H0 1117 aa26.39■■□□□ 1.82
PNKP-212ENST00000599454 ZNF112Q9UJU3 913 aa26.39■■□□□ 1.82
PNKP-212ENST00000599454 SALL1Q9NSC2 1324 aa26.39■■□□□ 1.81
PNKP-212ENST00000599454 ZBTB22O15209 634 aa26.38■■□□□ 1.81
PNKP-212ENST00000599454 LDHBP07195 334 aaKnown RBP26.38■■□□□ 1.81
PNKP-212ENST00000599454 CDC42EP5Q6NZY7 148 aa26.38■■□□□ 1.81
PNKP-212ENST00000599454 MIGA2Q7L4E1 593 aa26.38■■□□□ 1.81
PNKP-212ENST00000599454 CT47B1P0C2W7 299 aaPredicted RBP26.37■■□□□ 1.81
PNKP-212ENST00000599454 INPP5BP32019 993 aa26.37■■□□□ 1.81
PNKP-212ENST00000599454 ANKRD23Q86SG2 305 aa26.37■■□□□ 1.81
PNKP-212ENST00000599454 DENND2AQ9ULE3 1009 aa26.37■■□□□ 1.81
PNKP-212ENST00000599454 KCNH4Q9UQ05 1017 aa26.37■■□□□ 1.81
PNKP-212ENST00000599454 PRDX5P30044 214 aa26.36■■□□□ 1.81
PNKP-212ENST00000599454 DIXDC1Q155Q3 683 aa26.36■■□□□ 1.81
PNKP-212ENST00000599454 NOL9Q5SY16 702 aaKnown RBP26.36■■□□□ 1.81
PNKP-212ENST00000599454 SIL1Q9H173 461 aa26.36■■□□□ 1.81
PNKP-212ENST00000599454 MGAMO43451 1857 aa26.35■■□□□ 1.81
PNKP-212ENST00000599454 IL15P40933 162 aaPredicted RBP26.35■■□□□ 1.81
PNKP-212ENST00000599454 TCP10Q12799 353 aa26.35■■□□□ 1.81
PNKP-212ENST00000599454 SLC4A8Q2Y0W8 1093 aa26.35■■□□□ 1.81
PNKP-212ENST00000599454 C17orf99Q6UX52 265 aa26.35■■□□□ 1.81
PNKP-212ENST00000599454 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.35■■□□□ 1.81
PNKP-212ENST00000599454 CEP290O15078 2479 aa26.34■■□□□ 1.81
PNKP-212ENST00000599454 NFIAQ12857 509 aa26.34■■□□□ 1.81
PNKP-212ENST00000599454 ZGPATQ8N5A5 531 aaKnown RBP26.34■■□□□ 1.81
PNKP-212ENST00000599454 ARHGAP39Q9C0H5 1083 aa26.34■■□□□ 1.81
PNKP-212ENST00000599454 MKI67P46013 3256 aaKnown RBP26.34■■□□□ 1.81
PNKP-212ENST00000599454 TRMT2AQ8IZ69 625 aaKnown RBP26.33■■□□□ 1.81
PNKP-212ENST00000599454 API5Q9BZZ5 524 aaKnown RBP26.33■■□□□ 1.81
PNKP-212ENST00000599454 USP40Q9NVE5 1235 aa26.33■■□□□ 1.81
PNKP-212ENST00000599454 FAM198AQ9UFP1 575 aa26.33■■□□□ 1.81
PNKP-212ENST00000599454 PTPRFP10586 1907 aa26.32■■□□□ 1.8
PNKP-212ENST00000599454 HABP4Q5JVS0 413 aaKnown RBP26.32■■□□□ 1.8
PNKP-212ENST00000599454 PDHXO00330 501 aa26.31■■□□□ 1.8
PNKP-212ENST00000599454 HOXD10P28358 340 aa26.31■■□□□ 1.8
PNKP-212ENST00000599454 PHKA1P46020 1223 aa26.31■■□□□ 1.8
PNKP-212ENST00000599454 CDCA7LQ96GN5 454 aa26.31■■□□□ 1.8
PNKP-212ENST00000599454 COPRSQ9NQ92 184 aa26.31■■□□□ 1.8
PNKP-212ENST00000599454 NOB1Q9ULX3 412 aaKnown RBP26.31■■□□□ 1.8
PNKP-212ENST00000599454 ADGRA2Q96PE1 1338 aa26.31■■□□□ 1.8
PNKP-212ENST00000599454 CXCL11O14625 94 aa26.3■■□□□ 1.8
PNKP-212ENST00000599454 SH3TC2Q8TF17 1288 aa26.3■■□□□ 1.8
PNKP-212ENST00000599454 IDI2Q9BXS1 227 aa26.3■■□□□ 1.8
PNKP-212ENST00000599454 CPA4Q9UI42 421 aa26.3■■□□□ 1.8
PNKP-212ENST00000599454 LRRFIP2Q9Y608 721 aaKnown RBP26.3■■□□□ 1.8
PNKP-212ENST00000599454 DOCK1Q14185 1865 aa26.3■■□□□ 1.8
PNKP-212ENST00000599454 ENTPD3O75355 529 aa26.29■■□□□ 1.8
PNKP-212ENST00000599454 SLF2Q8IX21 1173 aa26.29■■□□□ 1.8
PNKP-212ENST00000599454 PARK7Q99497 189 aaKnown RBP26.29■■□□□ 1.8
PNKP-212ENST00000599454 SRRDQ9UH36 339 aa26.29■■□□□ 1.8
PNKP-212ENST00000599454 GAKO14976 1311 aa26.29■■□□□ 1.8
PNKP-212ENST00000599454 PDS5AQ29RF7 1337 aaKnown RBP26.29■■□□□ 1.8
PNKP-212ENST00000599454 PSMC4P43686 418 aa26.28■■□□□ 1.8
PNKP-212ENST00000599454 MOGSQ13724 837 aa26.28■■□□□ 1.8
PNKP-212ENST00000599454 CCDC102BQ68D86 513 aa26.28■■□□□ 1.8
PNKP-212ENST00000599454 ATRNL1Q5VV63 1379 aa26.28■■□□□ 1.8
PNKP-212ENST00000599454 PHIPQ8WWQ0 1821 aa26.28■■□□□ 1.8
PNKP-212ENST00000599454 BRCA2P51587 3418 aa26.27■■□□□ 1.8
PNKP-212ENST00000599454 TRIM47Q96LD4 638 aa26.27■■□□□ 1.8
PNKP-212ENST00000599454 PA2G4Q9UQ80 394 aaKnown RBP26.27■■□□□ 1.8
PNKP-212ENST00000599454 RFX7Q2KHR2 1363 aa26.26■■□□□ 1.79
PNKP-212ENST00000599454 RGS3P49796 1198 aa26.26■■□□□ 1.79
PNKP-212ENST00000599454 DZIP1Q86YF9 867 aaKnown RBP26.26■■□□□ 1.79
PNKP-212ENST00000599454 ZFPM1Q8IX07 1006 aa26.26■■□□□ 1.79
PNKP-212ENST00000599454 SCYL3Q8IZE3 742 aa26.26■■□□□ 1.79
PNKP-212ENST00000599454 FAM163AQ96GL9 167 aaPredicted RBP26.26■■□□□ 1.79
PNKP-212ENST00000599454 PHF20L1A8MW92 1017 aa26.25■■□□□ 1.79
PNKP-212ENST00000599454 FMNL1O95466 1100 aaPredicted RBP26.25■■□□□ 1.79
PNKP-212ENST00000599454 MYCP01106 439 aaPredicted RBP26.25■■□□□ 1.79
PNKP-212ENST00000599454 OSBPP22059 807 aa26.25■■□□□ 1.79
PNKP-212ENST00000599454 CTGFP29279 349 aa26.25■■□□□ 1.79
PNKP-212ENST00000599454 SPTY2D1Q68D10 685 aaPredicted RBP26.25■■□□□ 1.79
PNKP-212ENST00000599454 FASTKD5Q7L8L6 764 aaKnown RBP26.25■■□□□ 1.79
PNKP-212ENST00000599454 RAET1EQ8TD07 263 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms