RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 CDC42EP5Q6NZY7 148 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 CDAN1Q8IWY9 1227 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 HOOK2Q96ED9 719 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 FAM163AQ96GL9 167 aaPredicted RBP20.47■□□□□ 0.87
USHBP1-208ENST00000598309 CSRNP1Q96S65 589 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 EXOC6BQ9Y2D4 811 aa20.47■□□□□ 0.87
USHBP1-208ENST00000598309 USP2O75604 605 aaPredicted RBP20.46■□□□□ 0.87
USHBP1-208ENST00000598309 TTC39AQ5SRH9 613 aa20.46■□□□□ 0.87
USHBP1-208ENST00000598309 PI16Q6UXB8 463 aa20.46■□□□□ 0.87
USHBP1-208ENST00000598309 ANKRD13AQ8IZ07 590 aa20.46■□□□□ 0.87
USHBP1-208ENST00000598309 DBNLQ9UJU6 430 aaKnown RBP20.46■□□□□ 0.87
USHBP1-208ENST00000598309 IFFO2Q5TF58 517 aa20.45■□□□□ 0.86
USHBP1-208ENST00000598309 SPRYD7Q5W111 196 aa20.45■□□□□ 0.86
USHBP1-208ENST00000598309 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
USHBP1-208ENST00000598309 IGSF3O75054 1194 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 ZBTB48P10074 688 aaPredicted RBP20.44■□□□□ 0.86
USHBP1-208ENST00000598309 GSTO1P78417 241 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 MECOMQ03112 1051 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 SIRT2Q8IXJ6 389 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 FAM151AQ8WW52 585 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 EAF2Q96CJ1 260 aaPredicted RBP20.44■□□□□ 0.86
USHBP1-208ENST00000598309 SLC10A4Q96EP9 437 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 CLMNQ96JQ2 1002 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 USP40Q9NVE5 1235 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 RFX7Q2KHR2 1363 aa20.44■□□□□ 0.86
USHBP1-208ENST00000598309 SREBF2Q12772 1141 aa20.43■□□□□ 0.86
USHBP1-208ENST00000598309 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
USHBP1-208ENST00000598309 IDI2Q9BXS1 227 aa20.43■□□□□ 0.86
USHBP1-208ENST00000598309 RNF186Q9NXI6 227 aa20.43■□□□□ 0.86
USHBP1-208ENST00000598309 TLR7Q9NYK1 1049 aaKnown RBP20.43■□□□□ 0.86
USHBP1-208ENST00000598309 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
USHBP1-208ENST00000598309 LDHCP07864 332 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 TM4SF4P48230 202 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 NFIAQ12857 509 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 DCAF15Q66K64 600 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 TBC1D9Q6ZT07 1266 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.42■□□□□ 0.86
USHBP1-208ENST00000598309 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 NSUN4Q96CB9 384 aaKnown RBP20.42■□□□□ 0.86
USHBP1-208ENST00000598309 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 CCDC8Q9H0W5 538 aaPredicted RBP20.42■□□□□ 0.86
USHBP1-208ENST00000598309 FAM198AQ9UFP1 575 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 MYH2Q9UKX2 1941 aa20.42■□□□□ 0.86
USHBP1-208ENST00000598309 OTOFQ9HC10 1997 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 GPR75-ASB3A0A0A6YYF3 556 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 ENTPD3O75355 529 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 MAP4K4O95819 1239 aaPredicted RBP20.41■□□□□ 0.86
USHBP1-208ENST00000598309 BTDP43251 543 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 MKRN3Q13064 507 aaKnown RBP20.41■□□□□ 0.86
USHBP1-208ENST00000598309 AACSQ86V21 672 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 RAI14Q9P0K7 980 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
USHBP1-208ENST00000598309 MANSC4A6NHS7 340 aaPredicted RBP20.4■□□□□ 0.86
USHBP1-208ENST00000598309 RAB11FIP3O75154 756 aa20.4■□□□□ 0.86
USHBP1-208ENST00000598309 MAP3K9P80192 1104 aa20.4■□□□□ 0.86
USHBP1-208ENST00000598309 TCP10Q12799 353 aa20.4■□□□□ 0.86
USHBP1-208ENST00000598309 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.4■□□□□ 0.86
USHBP1-208ENST00000598309 AKAP11Q9UKA4 1901 aa20.39■□□□□ 0.86
USHBP1-208ENST00000598309 LAMB1P07942 1786 aa20.39■□□□□ 0.86
USHBP1-208ENST00000598309 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.86
USHBP1-208ENST00000598309 TRPA1O75762 1119 aa20.39■□□□□ 0.85
USHBP1-208ENST00000598309 VGLL4Q14135 290 aa20.39■□□□□ 0.85
USHBP1-208ENST00000598309 CLASRPQ8N2M8 674 aaKnown RBP20.39■□□□□ 0.85
USHBP1-208ENST00000598309 YTHDC1Q96MU7 727 aaKnown RBP20.39■□□□□ 0.85
USHBP1-208ENST00000598309 SNRKQ9NRH2 765 aa20.39■□□□□ 0.85
USHBP1-208ENST00000598309 CSADQ9Y600 493 aa20.39■□□□□ 0.85
USHBP1-208ENST00000598309 NPM3O75607 178 aaKnown RBP20.38■□□□□ 0.85
USHBP1-208ENST00000598309 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
USHBP1-208ENST00000598309 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
USHBP1-208ENST00000598309 RGS3P49796 1198 aa20.38■□□□□ 0.85
USHBP1-208ENST00000598309 RRP1P56182 461 aaKnown RBP20.38■□□□□ 0.85
USHBP1-208ENST00000598309 INHBEP58166 350 aa20.38■□□□□ 0.85
USHBP1-208ENST00000598309 RHBDL3P58872 404 aa20.38■□□□□ 0.85
USHBP1-208ENST00000598309 ZNF341Q9BYN7 854 aa20.38■□□□□ 0.85
USHBP1-208ENST00000598309 ELP3Q9H9T3 547 aa20.38■□□□□ 0.85
USHBP1-208ENST00000598309 IL1RAPL2Q9NP60 686 aa20.38■□□□□ 0.85
USHBP1-208ENST00000598309 ZAP70P43403 619 aa20.37■□□□□ 0.85
USHBP1-208ENST00000598309 WRNIP1Q96S55 665 aa20.37■□□□□ 0.85
USHBP1-208ENST00000598309 ALDH1A1P00352 501 aa20.36■□□□□ 0.85
USHBP1-208ENST00000598309 GJA5P36382 358 aa20.36■□□□□ 0.85
USHBP1-208ENST00000598309 NAA16Q6N069 864 aaPredicted RBP20.36■□□□□ 0.85
USHBP1-208ENST00000598309 OPTNQ96CV9 577 aa20.36■□□□□ 0.85
USHBP1-208ENST00000598309 CFHR5Q9BXR6 569 aa20.36■□□□□ 0.85
USHBP1-208ENST00000598309 ATRNL1Q5VV63 1379 aa20.35■□□□□ 0.85
USHBP1-208ENST00000598309 SPDYE5A6NIY4 337 aa20.35■□□□□ 0.85
USHBP1-208ENST00000598309 TMED8Q6PL24 325 aaPredicted RBP20.35■□□□□ 0.85
USHBP1-208ENST00000598309 ZFPM1Q8IX07 1006 aa20.35■□□□□ 0.85
USHBP1-208ENST00000598309 NOL10Q9BSC4 688 aaKnown RBP20.35■□□□□ 0.85
USHBP1-208ENST00000598309 PIH1D3Q9NQM4 214 aaKnown RBP20.35■□□□□ 0.85
USHBP1-208ENST00000598309 ZNF112Q9UJU3 913 aa20.35■□□□□ 0.85
USHBP1-208ENST00000598309 SNCAIPQ9Y6H5 919 aa20.35■□□□□ 0.85
USHBP1-208ENST00000598309 COL2A1P02458 1487 aaPredicted RBP20.35■□□□□ 0.85
USHBP1-208ENST00000598309 TESPA1A2RU30 521 aaPredicted RBP20.34■□□□□ 0.85
USHBP1-208ENST00000598309 APBB1O00213 710 aa20.34■□□□□ 0.85
USHBP1-208ENST00000598309 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms