RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 SLC5A1P13866 664 aa17.59■□□□□ 0.41
DNMT1-213ENST00000587604 PPIL2Q13356 520 aa17.59■□□□□ 0.41
DNMT1-213ENST00000587604 SNAPC2Q13487 334 aa17.59■□□□□ 0.41
DNMT1-213ENST00000587604 CEP290O15078 2479 aa17.58■□□□□ 0.41
DNMT1-213ENST00000587604 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
DNMT1-213ENST00000587604 PPATQ06203 517 aa17.58■□□□□ 0.4
DNMT1-213ENST00000587604 SLC9C1Q4G0N8 1177 aa17.58■□□□□ 0.4
DNMT1-213ENST00000587604 FAM151AQ8WW52 585 aa17.58■□□□□ 0.4
DNMT1-213ENST00000587604 ZNF341Q9BYN7 854 aa17.58■□□□□ 0.4
DNMT1-213ENST00000587604 PTCH2Q9Y6C5 1203 aa17.58■□□□□ 0.4
DNMT1-213ENST00000587604 LACTBP83111 547 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-213ENST00000587604 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
DNMT1-213ENST00000587604 KIF22Q14807 665 aa17.57■□□□□ 0.4
DNMT1-213ENST00000587604 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
DNMT1-213ENST00000587604 MIGA2Q7L4E1 593 aa17.57■□□□□ 0.4
DNMT1-213ENST00000587604 ATG9AQ7Z3C6 839 aa17.57■□□□□ 0.4
DNMT1-213ENST00000587604 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
DNMT1-213ENST00000587604 GNRH1P01148 92 aa17.56■□□□□ 0.4
DNMT1-213ENST00000587604 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
DNMT1-213ENST00000587604 INPP5BP32019 993 aa17.55■□□□□ 0.4
DNMT1-213ENST00000587604 CDC42EP5Q6NZY7 148 aa17.55■□□□□ 0.4
DNMT1-213ENST00000587604 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
DNMT1-213ENST00000587604 DAGLAQ9Y4D2 1042 aa17.55■□□□□ 0.4
DNMT1-213ENST00000587604 CIAO1O76071 339 aa17.54■□□□□ 0.4
DNMT1-213ENST00000587604 PRMT2P55345 433 aa17.54■□□□□ 0.4
DNMT1-213ENST00000587604 TCP10Q12799 353 aa17.54■□□□□ 0.4
DNMT1-213ENST00000587604 SLC4A8Q2Y0W8 1093 aa17.54■□□□□ 0.4
DNMT1-213ENST00000587604 HABP4Q5JVS0 413 aaKnown RBP17.54■□□□□ 0.4
DNMT1-213ENST00000587604 GNL3LQ9NVN8 582 aaKnown RBP17.54■□□□□ 0.4
DNMT1-213ENST00000587604 CEP126Q9P2H0 1117 aa17.54■□□□□ 0.4
DNMT1-213ENST00000587604 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
DNMT1-213ENST00000587604 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
DNMT1-213ENST00000587604 PRDX5P30044 214 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 NFIAQ12857 509 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 DIXDC1Q155Q3 683 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 C17orf99Q6UX52 265 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 ANKRD23Q86SG2 305 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
DNMT1-213ENST00000587604 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 KCNH4Q9UQ05 1017 aa17.53■□□□□ 0.4
DNMT1-213ENST00000587604 SALL1Q9NSC2 1324 aa17.52■□□□□ 0.4
DNMT1-213ENST00000587604 ZSWIM8A7E2V4 1837 aa17.52■□□□□ 0.4
DNMT1-213ENST00000587604 SIL1Q9H173 461 aa17.52■□□□□ 0.4
DNMT1-213ENST00000587604 USP40Q9NVE5 1235 aa17.52■□□□□ 0.4
DNMT1-213ENST00000587604 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
DNMT1-213ENST00000587604 HDAC5Q9UQL6 1122 aa17.52■□□□□ 0.4
DNMT1-213ENST00000587604 PDHXO00330 501 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 SEMA3EO15041 775 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 ZBTB22O15209 634 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 NOL9Q5SY16 702 aaKnown RBP17.51■□□□□ 0.39
DNMT1-213ENST00000587604 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 FAM198AQ9UFP1 575 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 CPA4Q9UI42 421 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
DNMT1-213ENST00000587604 MYCP01106 439 aaPredicted RBP17.5■□□□□ 0.39
DNMT1-213ENST00000587604 HOXD10P28358 340 aa17.5■□□□□ 0.39
DNMT1-213ENST00000587604 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
DNMT1-213ENST00000587604 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
DNMT1-213ENST00000587604 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
DNMT1-213ENST00000587604 CXCL11O14625 94 aa17.49■□□□□ 0.39
DNMT1-213ENST00000587604 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
DNMT1-213ENST00000587604 CTGFP29279 349 aa17.49■□□□□ 0.39
DNMT1-213ENST00000587604 PSMC4P43686 418 aa17.49■□□□□ 0.39
DNMT1-213ENST00000587604 PHKA1P46020 1223 aa17.49■□□□□ 0.39
DNMT1-213ENST00000587604 MOGSQ13724 837 aa17.49■□□□□ 0.39
DNMT1-213ENST00000587604 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
DNMT1-213ENST00000587604 SRRDQ9UH36 339 aa17.49■□□□□ 0.39
DNMT1-213ENST00000587604 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
DNMT1-213ENST00000587604 ADGRA2Q96PE1 1338 aa17.48■□□□□ 0.39
DNMT1-213ENST00000587604 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
DNMT1-213ENST00000587604 TRIM47Q96LD4 638 aa17.48■□□□□ 0.39
DNMT1-213ENST00000587604 IDI2Q9BXS1 227 aa17.48■□□□□ 0.39
DNMT1-213ENST00000587604 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
DNMT1-213ENST00000587604 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
DNMT1-213ENST00000587604 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
DNMT1-213ENST00000587604 ENTPD3O75355 529 aa17.47■□□□□ 0.39
DNMT1-213ENST00000587604 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
DNMT1-213ENST00000587604 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
DNMT1-213ENST00000587604 CCDC102BQ68D86 513 aa17.47■□□□□ 0.39
DNMT1-213ENST00000587604 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
DNMT1-213ENST00000587604 PA2G4Q9UQ80 394 aaKnown RBP17.47■□□□□ 0.39
DNMT1-213ENST00000587604 GAKO14976 1311 aa17.47■□□□□ 0.39
DNMT1-213ENST00000587604 TRIOBPQ9H2D6 2365 aa17.46■□□□□ 0.39
DNMT1-213ENST00000587604 OSBPP22059 807 aa17.46■□□□□ 0.39
DNMT1-213ENST00000587604 RGS3P49796 1198 aa17.46■□□□□ 0.39
DNMT1-213ENST00000587604 GPAT2Q6NUI2 795 aa17.46■□□□□ 0.39
DNMT1-213ENST00000587604 RAET1EQ8TD07 263 aa17.46■□□□□ 0.39
DNMT1-213ENST00000587604 FAM163AQ96GL9 167 aaPredicted RBP17.46■□□□□ 0.39
DNMT1-213ENST00000587604 PARK7Q99497 189 aaKnown RBP17.46■□□□□ 0.39
DNMT1-213ENST00000587604 DOCK2Q92608 1830 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 ATRNL1Q5VV63 1379 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 BCRP11274 1271 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 ADORA1P30542 326 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 GRK4P32298 578 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 TIMM10P62072 90 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 MAP3K10Q02779 954 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 FASTKD5Q7L8L6 764 aaKnown RBP17.45■□□□□ 0.38
DNMT1-213ENST00000587604 SLF2Q8IX21 1173 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms