RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ZNF112Q9UJU3 913 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 MAST3O60307 1309 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 PPATQ06203 517 aa18.12■□□□□ 0.49
SDF2-202ENST00000585428 PPIL2Q13356 520 aa18.12■□□□□ 0.49
SDF2-202ENST00000585428 MIGA2Q7L4E1 593 aa18.12■□□□□ 0.49
SDF2-202ENST00000585428 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
SDF2-202ENST00000585428 PTCH2Q9Y6C5 1203 aa18.12■□□□□ 0.49
SDF2-202ENST00000585428 BRCA2P51587 3418 aa18.11■□□□□ 0.49
SDF2-202ENST00000585428 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
SDF2-202ENST00000585428 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
SDF2-202ENST00000585428 TMEM106CQ9BVX2 250 aa18.11■□□□□ 0.49
SDF2-202ENST00000585428 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
SDF2-202ENST00000585428 WDHD1O75717 1129 aaPredicted RBP18.1■□□□□ 0.49
SDF2-202ENST00000585428 GNRH1P01148 92 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 SLC5A1P13866 664 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 INPP5BP32019 993 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 LACTBP83111 547 aaPredicted RBP18.1■□□□□ 0.49
SDF2-202ENST00000585428 SLC9C1Q4G0N8 1177 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 HABP4Q5JVS0 413 aaKnown RBP18.1■□□□□ 0.49
SDF2-202ENST00000585428 CDC42EP5Q6NZY7 148 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 C17orf99Q6UX52 265 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 ZNF341Q9BYN7 854 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 ARHGAP39Q9C0H5 1083 aa18.1■□□□□ 0.49
SDF2-202ENST00000585428 RPAP1Q9BWH6 1393 aaPredicted RBP18.09■□□□□ 0.49
SDF2-202ENST00000585428 ZBTB22O15209 634 aa18.09■□□□□ 0.49
SDF2-202ENST00000585428 TRMT2AQ8IZ69 625 aaKnown RBP18.09■□□□□ 0.49
SDF2-202ENST00000585428 DAGLAQ9Y4D2 1042 aa18.09■□□□□ 0.49
SDF2-202ENST00000585428 OTOFQ9HC10 1997 aa18.08■□□□□ 0.49
SDF2-202ENST00000585428 CIAO1O76071 339 aa18.08■□□□□ 0.48
SDF2-202ENST00000585428 MOGSQ13724 837 aa18.08■□□□□ 0.48
SDF2-202ENST00000585428 KIF22Q14807 665 aa18.08■□□□□ 0.48
SDF2-202ENST00000585428 ANKRD23Q86SG2 305 aa18.08■□□□□ 0.48
SDF2-202ENST00000585428 FAM198AQ9UFP1 575 aa18.08■□□□□ 0.48
SDF2-202ENST00000585428 KCNH4Q9UQ05 1017 aa18.08■□□□□ 0.48
SDF2-202ENST00000585428 PRDX5P30044 214 aa18.07■□□□□ 0.48
SDF2-202ENST00000585428 TCP10Q12799 353 aa18.07■□□□□ 0.48
SDF2-202ENST00000585428 NFIAQ12857 509 aa18.07■□□□□ 0.48
SDF2-202ENST00000585428 DIXDC1Q155Q3 683 aa18.07■□□□□ 0.48
SDF2-202ENST00000585428 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
SDF2-202ENST00000585428 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
SDF2-202ENST00000585428 CEP126Q9P2H0 1117 aa18.07■□□□□ 0.48
SDF2-202ENST00000585428 ARAP2Q8WZ64 1704 aa18.06■□□□□ 0.48
SDF2-202ENST00000585428 SALL1Q9NSC2 1324 aa18.06■□□□□ 0.48
SDF2-202ENST00000585428 CTGFP29279 349 aa18.06■□□□□ 0.48
SDF2-202ENST00000585428 PRMT2P55345 433 aa18.06■□□□□ 0.48
SDF2-202ENST00000585428 NOL9Q5SY16 702 aaKnown RBP18.06■□□□□ 0.48
SDF2-202ENST00000585428 ZFPM1Q8IX07 1006 aa18.06■□□□□ 0.48
SDF2-202ENST00000585428 USP40Q9NVE5 1235 aa18.06■□□□□ 0.48
SDF2-202ENST00000585428 GNL3LQ9NVN8 582 aaKnown RBP18.06■□□□□ 0.48
SDF2-202ENST00000585428 PDHXO00330 501 aa18.05■□□□□ 0.48
SDF2-202ENST00000585428 LDHBP07195 334 aaKnown RBP18.05■□□□□ 0.48
SDF2-202ENST00000585428 ATP2B3Q16720 1220 aa18.05■□□□□ 0.48
SDF2-202ENST00000585428 SLC4A8Q2Y0W8 1093 aa18.05■□□□□ 0.48
SDF2-202ENST00000585428 SH3TC2Q8TF17 1288 aa18.05■□□□□ 0.48
SDF2-202ENST00000585428 PHF20L1A8MW92 1017 aa18.04■□□□□ 0.48
SDF2-202ENST00000585428 SEMA3EO15041 775 aa18.04■□□□□ 0.48
SDF2-202ENST00000585428 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
SDF2-202ENST00000585428 MAP3K10Q02779 954 aa18.04■□□□□ 0.48
SDF2-202ENST00000585428 SIL1Q9H173 461 aa18.04■□□□□ 0.48
SDF2-202ENST00000585428 CPA4Q9UI42 421 aa18.04■□□□□ 0.48
SDF2-202ENST00000585428 DENND2AQ9ULE3 1009 aa18.04■□□□□ 0.48
SDF2-202ENST00000585428 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
SDF2-202ENST00000585428 ADGRA2Q96PE1 1338 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 CXCL11O14625 94 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 IL15P40933 162 aaPredicted RBP18.03■□□□□ 0.48
SDF2-202ENST00000585428 PSMC4P43686 418 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 PHKA1P46020 1223 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 GPAT2Q6NUI2 795 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 FAM163AQ96GL9 167 aaPredicted RBP18.03■□□□□ 0.48
SDF2-202ENST00000585428 TRIM47Q96LD4 638 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 IDI2Q9BXS1 227 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 COPRSQ9NQ92 184 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 SRRDQ9UH36 339 aa18.03■□□□□ 0.48
SDF2-202ENST00000585428 MYCP01106 439 aaPredicted RBP18.02■□□□□ 0.48
SDF2-202ENST00000585428 HDAC5Q9UQL6 1122 aa18.02■□□□□ 0.48
SDF2-202ENST00000585428 RBBP6Q7Z6E9 1792 aaKnown RBP18.02■□□□□ 0.47
SDF2-202ENST00000585428 ENTPD3O75355 529 aa18.01■□□□□ 0.47
SDF2-202ENST00000585428 CT47B1P0C2W7 299 aaPredicted RBP18.01■□□□□ 0.47
SDF2-202ENST00000585428 OSBPP22059 807 aa18.01■□□□□ 0.47
SDF2-202ENST00000585428 HOXD10P28358 340 aa18.01■□□□□ 0.47
SDF2-202ENST00000585428 TIMM10P62072 90 aa18.01■□□□□ 0.47
SDF2-202ENST00000585428 CCDC102BQ68D86 513 aa18.01■□□□□ 0.47
SDF2-202ENST00000585428 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
SDF2-202ENST00000585428 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
SDF2-202ENST00000585428 KIAA0100Q14667 2235 aaKnown RBP18■□□□□ 0.47
SDF2-202ENST00000585428 ADORA1P30542 326 aa18■□□□□ 0.47
SDF2-202ENST00000585428 MTFR1Q15390 333 aa18■□□□□ 0.47
SDF2-202ENST00000585428 SH3BP5LQ7L8J4 393 aa18■□□□□ 0.47
SDF2-202ENST00000585428 ATRNL1Q5VV63 1379 aa18■□□□□ 0.47
SDF2-202ENST00000585428 GAKO14976 1311 aa17.99■□□□□ 0.47
SDF2-202ENST00000585428 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
SDF2-202ENST00000585428 BCRP11274 1271 aa17.99■□□□□ 0.47
SDF2-202ENST00000585428 PTPRAP18433 802 aa17.99■□□□□ 0.47
SDF2-202ENST00000585428 RGS3P49796 1198 aa17.99■□□□□ 0.47
SDF2-202ENST00000585428 ZGPATQ8N5A5 531 aaKnown RBP17.99■□□□□ 0.47
SDF2-202ENST00000585428 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
SDF2-202ENST00000585428 COLQQ9Y215 455 aaPredicted RBP17.99■□□□□ 0.47
SDF2-202ENST00000585428 AFG3L2Q9Y4W6 797 aa17.99■□□□□ 0.47
SDF2-202ENST00000585428 ZHX2Q9Y6X8 837 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms