RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ZCCHC17Q9NP64 241 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 PPIL2Q13356 520 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SNAPC2Q13487 334 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 KIF22Q14807 665 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SLC9C1Q4G0N8 1177 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 WDR66Q8TBY9 1149 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 LPIN2Q92539 896 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ZNF341Q9BYN7 854 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 PTCH2Q9Y6C5 1203 aa12.09□□□□□ -0.47
CDK5RAP3-227ENST00000583352 MYH13Q9UKX3 1938 aa12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 BTBD19C9JJ37 291 aa12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 IRF6O14896 467 aa12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 TLR2O60603 784 aa12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 EN2P19622 333 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 RFX5P48382 616 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ZNF333Q96JL9 665 aa12.08□□□□□ -0.48
CDK5RAP3-227ENST00000583352 PPATQ06203 517 aa12.07□□□□□ -0.48
CDK5RAP3-227ENST00000583352 SLC4A8Q2Y0W8 1093 aa12.07□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
CDK5RAP3-227ENST00000583352 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
CDK5RAP3-227ENST00000583352 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
CDK5RAP3-227ENST00000583352 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-227ENST00000583352 GNRH1P01148 92 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 INPP5BP32019 993 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 PRMT2P55345 433 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 DAGLAQ9Y4D2 1042 aa12.06□□□□□ -0.48
CDK5RAP3-227ENST00000583352 CIAO1O76071 339 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 LDHBP07195 334 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 TCP10Q12799 353 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ANKRD23Q86SG2 305 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ARHGAP39Q9C0H5 1083 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 SIL1Q9H173 461 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
CDK5RAP3-227ENST00000583352 SEMA3EO15041 775 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 PRDX5P30044 214 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 NOL9Q5SY16 702 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 SH3TC2Q8TF17 1288 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ZNF112Q9UJU3 913 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 KCNH4Q9UQ05 1017 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 KIAA0100Q14667 2235 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 SALL1Q9NSC2 1324 aa12.04□□□□□ -0.48
CDK5RAP3-227ENST00000583352 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 PDHXO00330 501 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 BCAR3O75815 825 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 CT47B1P0C2W7 299 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 HOXD10P28358 340 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 IL15P40933 162 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 NFIAQ12857 509 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 C17orf99Q6UX52 265 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
CDK5RAP3-227ENST00000583352 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 PSMC4P43686 418 aa12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 PHKA1P46020 1223 aa12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 PARK7Q99497 189 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 SRRDQ9UH36 339 aa12.02□□□□□ -0.49
CDK5RAP3-227ENST00000583352 CXCL11O14625 94 aa12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 ZBTB22O15209 634 aa12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 ENTPD3O75355 529 aa12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 RAET1EQ8TD07 263 aa12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 NOB1Q9ULX3 412 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 LRRFIP2Q9Y608 721 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 ADGRA2Q96PE1 1338 aa12.01□□□□□ -0.49
CDK5RAP3-227ENST00000583352 OSBPP22059 807 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 CTGFP29279 349 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 RGS3P49796 1198 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 MOGSQ13724 837 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 CCDC102BQ68D86 513 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 ZSCAN29Q8IWY8 852 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 ZFPM1Q8IX07 1006 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 SLF2Q8IX21 1173 aa12□□□□□ -0.49
CDK5RAP3-227ENST00000583352 SCYL3Q8IZE3 742 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms