RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ADCY2	Q08462	1091 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	PLCB4	Q15147	1175 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	C6orf118	Q5T5N4	469 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	PPP1R14B	Q96C90	147 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	SCOC	Q9UIL1	159 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	L1RE1	Q9UN81	338 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	WDR62	O43379	1518 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	ZNF202	O95125	648 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC63	Q8NA47	563 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	KLHL14	Q9P2G3	628 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.78	□□□□□ -1.64	3e-6	■■■□□ 15.1
MACF1-231	ENST00000564288	SKAP1	Q86WV1	359 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	PARP9	Q8IXQ6	854 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	OSBPL3	Q9H4L5	887 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	ZNF189	O75820	626 aa	Predicted RBP	4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	EMB	Q6PCB8	327 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	NEK11	Q8NG66	645 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288		H7C1D1	291 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	RNF40	O75150	1001 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	RHOXF2B	P0C7M4	288 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	RHOXF2	Q9BQY4	288 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	MIS18A	Q9NYP9	233 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	STAP2	Q9UGK3	403 aa		4.78	□□□□□ -1.64
MACF1-231	ENST00000564288	ARHGAP5	Q13017	1502 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	TRIM66	O15016	1216 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	DHX32	Q7L7V1	743 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	YY1	P25490	414 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	DDIT3	P35638	169 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	GNGT1	P63211	74 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	ALDH1L1	O75891	902 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	MRPL50	Q8N5N7	158 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	SPTLC2	O15270	562 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	BPIFA3	Q9BQP9	254 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	DDR1	Q08345	913 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288		Q9H521	79 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	FOXP2	O15409	715 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	GSTA2	P09210	222 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	CUL3	Q13618	768 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	VPS52	Q8N1B4	723 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	MRPS27	Q92552	414 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	HAUS1	Q96CS2	278 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PLVAP	Q9BX97	442 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF148	Q9UQR1	794 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	FANCA	O15360	1455 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	NFXL1	Q6ZNB6	911 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	POGZ	Q7Z3K3	1410 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	FBLN2	P98095	1184 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	CCDC80	Q76M96	950 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	SLC12A5	Q9H2X9	1139 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	IBSP	P21815	317 aa	Predicted RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF710	Q8N1W2	664 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	TRIML1	Q8N9V2	468 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PECAM1	P16284	738 aa	Predicted RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	SESN3	P58005	492 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PLA2G4D	Q86XP0	818 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	TAOK1	Q7L7X3	1001 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	HYPK	Q9NX55	129 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	MED14	O60244	1454 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	NACAP1	Q9BZK3	213 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	SUN1	O94901	812 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	TCP1	P17987	556 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	TNNC1	P63316	161 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PARP2	Q9UGN5	583 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PPP2R2C	Q9Y2T4	447 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	STK24	Q9Y6E0	443 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	CCDC169	A6NNP5	214 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	ABCB6	Q9NP58	842 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	NKIRAS1	Q9NYS0	192 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	LMOD1	P29536	600 aa	Predicted RBP	4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	IFT81	Q8WYA0	676 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	TTC37	Q6PGP7	1564 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	CLTA	P09496	248 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	ZBTB16	Q05516	673 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	PPP1R13B	Q96KQ4	1090 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	FHOD1	Q9Y613	1164 aa		4.77	□□□□□ -1.65
MACF1-231	ENST00000564288	FAM135B	Q49AJ0	1406 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	PSMD2	Q13200	908 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF287	Q9HBT7	754 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	RIPOR2	Q9Y4F9	1068 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	SFSWAP	Q12872	951 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	RAPGEF6	Q8TEU7	1601 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	KDM4C	Q9H3R0	1056 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	EIF4G3	O43432	1585 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	SIL1	Q9H173	461 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ZSWIM6	Q9HCJ5	1215 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	IGSF22	Q8N9C0	903 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	WHAMM	Q8TF30	809 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	RPSA	P08865	295 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	VIM	P08670	466 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	DNAI2	Q9GZS0	605 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	BICRA	Q9NZM4	1560 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.76	□□□□□ -1.65	2e-6	■■■■□ 22.2
MACF1-231	ENST00000564288	ADAMTS12	P58397	1594 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	SPATA1	Q5VX52	437 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms