RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PTPN11Q06124 597 aaPredicted RBP3.81□□□□□ -1.8
CHD9-209ENST00000564255 DIEXFQ68CQ4 756 aaKnown RBP3.81□□□□□ -1.8
CHD9-209ENST00000564255 FCHSD1Q86WN1 690 aa3.81□□□□□ -1.8
CHD9-209ENST00000564255 ANKRD13AQ8IZ07 590 aa3.81□□□□□ -1.8
CHD9-209ENST00000564255 CELF2-AS1Q8N7Q2 184 aa3.81□□□□□ -1.8
CHD9-209ENST00000564255 DDX54Q8TDD1 881 aaKnown RBP3.81□□□□□ -1.8
CHD9-209ENST00000564255 WNT8BQ93098 351 aa3.81□□□□□ -1.8
CHD9-209ENST00000564255 ACTR10Q9NZ32 417 aa3.81□□□□□ -1.8
CHD9-209ENST00000564255 PRR36Q9H6K5 1346 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 H3BRJ5 948 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 GSTP1P09211 210 aaKnown RBP3.8□□□□□ -1.8
CHD9-209ENST00000564255 CDK11BP21127 795 aaKnown RBP3.8□□□□□ -1.8
CHD9-209ENST00000564255 EPHA1P21709 976 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 ADH6P28332 368 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 BAG6P46379 1132 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 TBC1D8BQ0IIM8 1120 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 IKBKEQ14164 716 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 DDR2Q16832 855 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 C20orf204Q6ZNR8 217 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 C19orf47Q8N9M1 422 aaKnown RBP3.8□□□□□ -1.8
CHD9-209ENST00000564255 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHD9-209ENST00000564255 STARD13Q9Y3M8 1113 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 CDC14CA4D256 554 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 MEIS3P2A8K0S8 358 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 EIF4EBP3O60516 100 aaPredicted RBP3.8□□□□□ -1.8
CHD9-209ENST00000564255 MCM4P33991 863 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 ILDR2Q71H61 639 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 BRINP2Q9C0B6 783 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 NRSN2Q9GZP1 204 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 LACRTQ9GZZ8 138 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 MBIPQ9NS73 344 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 KRT82Q9NSB4 513 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 R3HCC1Q9Y3T6 440 aaKnown RBP3.8□□□□□ -1.8
CHD9-209ENST00000564255 PCDHB14Q9Y5E9 798 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 TACC3Q9Y6A5 838 aa3.8□□□□□ -1.8
CHD9-209ENST00000564255 ELOA3CA0A087WX78 387 aaPredicted RBP3.79□□□□□ -1.8
CHD9-209ENST00000564255 ELOA3DA6NLF2 546 aaPredicted RBP3.79□□□□□ -1.8
CHD9-209ENST00000564255 GFRA2O00451 464 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 TM4SF5O14894 197 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 MX2P20592 715 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 RASGRF1Q13972 1273 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 ELOA3BQ3SY89 546 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 PLEKHG4Q58EX7 1191 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 HGSNATQ68CP4 663 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 TAB3Q8N5C8 712 aaPredicted RBP3.79□□□□□ -1.8
CHD9-209ENST00000564255 ELOA3Q8NG57 546 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 FERD3LQ96RJ6 166 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 PPM1GO15355 546 aaPredicted RBP3.79□□□□□ -1.8
CHD9-209ENST00000564255 BPNT1O95861 308 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 MPRIPQ6WCQ1 1025 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 GK5Q6ZS86 529 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 LILRB2Q8N423 598 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 CRBNQ96SW2 442 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 CBX8Q9HC52 389 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 OSGEPQ9NPF4 335 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 SNCAIPQ9Y6H5 919 aa3.79□□□□□ -1.8
CHD9-209ENST00000564255 CABP4P57796 275 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 PIP4K2BP78356 416 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 PSAPL1Q6NUJ1 521 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 GPR161Q8N6U8 529 aaKnown RBP3.78□□□□□ -1.8
CHD9-209ENST00000564255 JMYQ8N9B5 988 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 TNKS2Q9H2K2 1166 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 NSFL1CQ9UNZ2 370 aaKnown RBP3.78□□□□□ -1.8
CHD9-209ENST00000564255 FAM177BA6PVY3 158 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 CLSTN1O94985 981 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 FXNQ16595 210 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 GPBAR1Q8TDU6 330 aa3.78□□□□□ -1.8
CHD9-209ENST00000564255 PDPK1O15530 556 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 CDK8P49336 464 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 LRFN4Q6PJG9 635 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 SLCO4C1Q6ZQN7 724 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 IL22RA1Q8N6P7 574 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 SH3TC2Q8TF17 1288 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 ZNF669Q96BR6 464 aaPredicted RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 GGA1Q9UJY5 639 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 A0A1W2PQH9 124 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 NEURL1BA8MQ27 555 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 ZNF862O60290 1169 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 RGS9O75916 674 aaPredicted RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 GSTM4Q03013 218 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 C19orf57Q0VDD7 668 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 LRRFIP1Q32MZ4 808 aaKnown RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 MAP1SQ66K74 1059 aaPredicted RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 GDF6Q6KF10 455 aaPredicted RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 NPAS3Q8IXF0 933 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 GPATCH3Q96I76 525 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 DNAJC7Q99615 494 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 TM9SF2Q99805 663 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 CCDC86Q9H6F5 360 aaKnown RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 KANSL2Q9H9L4 492 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 MAPK8IP1Q9UQF2 711 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 PPME1Q9Y570 386 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 UPK3BL1B0FP48 263 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 C11orf95C9JLR9 678 aaPredicted RBP3.77□□□□□ -1.81
CHD9-209ENST00000564255 UPK3BL2E5RIL1 263 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 LCE2BO14633 110 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 GJB6O95452 261 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 CTSBP07858 339 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 VSIG8P0DPA2 414 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms