RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 SALL1Q9NSC2 1324 aa23.83■■□□□ 1.4
SLX1A-204ENST00000563995 F8W031 263 aaPredicted RBP23.82■■□□□ 1.4
SLX1A-204ENST00000563995 GPR25O00155 361 aa23.82■■□□□ 1.4
SLX1A-204ENST00000563995 MKRN3Q13064 507 aaKnown RBP23.82■■□□□ 1.4
SLX1A-204ENST00000563995 APOBEC3FQ8IUX4 373 aaKnown RBP23.82■■□□□ 1.4
SLX1A-204ENST00000563995 SMC5Q8IY18 1101 aa23.82■■□□□ 1.4
SLX1A-204ENST00000563995 SPATA5Q8NB90 893 aa23.82■■□□□ 1.4
SLX1A-204ENST00000563995 SUGT1Q9Y2Z0 365 aa23.82■■□□□ 1.4
SLX1A-204ENST00000563995 GRIK5Q16478 980 aa23.81■■□□□ 1.4
SLX1A-204ENST00000563995 FBXO46Q6PJ61 603 aaPredicted RBP23.81■■□□□ 1.4
SLX1A-204ENST00000563995 PI16Q6UXB8 463 aa23.81■■□□□ 1.4
SLX1A-204ENST00000563995 SSC5DA1L4H1 1573 aa23.81■■□□□ 1.4
SLX1A-204ENST00000563995 OTOFQ9HC10 1997 aa23.8■■□□□ 1.4
SLX1A-204ENST00000563995 NEFLP07196 543 aa23.8■■□□□ 1.4
SLX1A-204ENST00000563995 SREBF2Q12772 1141 aa23.8■■□□□ 1.4
SLX1A-204ENST00000563995 LDLRAD1Q5T700 205 aa23.8■■□□□ 1.4
SLX1A-204ENST00000563995 ARMC9Q7Z3E5 817 aa23.8■■□□□ 1.4
SLX1A-204ENST00000563995 ZGPATQ8N5A5 531 aaKnown RBP23.8■■□□□ 1.4
SLX1A-204ENST00000563995 TTF2Q9UNY4 1162 aaKnown RBP23.8■■□□□ 1.4
SLX1A-204ENST00000563995 ANKRD45Q5TZF3 282 aa23.79■■□□□ 1.4
SLX1A-204ENST00000563995 DLL1O00548 723 aa23.78■■□□□ 1.4
SLX1A-204ENST00000563995 PRKG1Q13976 671 aa23.78■■□□□ 1.4
SLX1A-204ENST00000563995 SPRYD7Q5W111 196 aa23.78■■□□□ 1.4
SLX1A-204ENST00000563995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
SLX1A-204ENST00000563995 R3HDMLQ9H3Y0 253 aa23.78■■□□□ 1.4
SLX1A-204ENST00000563995 ZBTB47Q9UFB7 747 aaPredicted RBP23.78■■□□□ 1.4
SLX1A-204ENST00000563995 MAST3O60307 1309 aa23.78■■□□□ 1.4
SLX1A-204ENST00000563995 RBBP6Q7Z6E9 1792 aaKnown RBP23.78■■□□□ 1.4
SLX1A-204ENST00000563995 PRDX5P30044 214 aa23.77■■□□□ 1.4
SLX1A-204ENST00000563995 SNRKQ9NRH2 765 aa23.77■■□□□ 1.4
SLX1A-204ENST00000563995 SERPINA10Q9UK55 444 aa23.77■■□□□ 1.4
SLX1A-204ENST00000563995 ANGEL1Q9UNK9 670 aaKnown RBP23.77■■□□□ 1.4
SLX1A-204ENST00000563995 FZD1Q9UP38 647 aa23.77■■□□□ 1.4
SLX1A-204ENST00000563995 LDHBP07195 334 aaKnown RBP23.76■■□□□ 1.39
SLX1A-204ENST00000563995 HDLBPQ00341 1268 aaKnown RBP23.76■■□□□ 1.39
SLX1A-204ENST00000563995 MTMR14Q8NCE2 650 aa23.76■■□□□ 1.39
SLX1A-204ENST00000563995 ABCF2Q9UG63 623 aa23.76■■□□□ 1.39
SLX1A-204ENST00000563995 ZAP70P43403 619 aa23.75■■□□□ 1.39
SLX1A-204ENST00000563995 MAP3K11Q16584 847 aa23.75■■□□□ 1.39
SLX1A-204ENST00000563995 CFAP100Q494V2 611 aa23.75■■□□□ 1.39
SLX1A-204ENST00000563995 SPTY2D1Q68D10 685 aaPredicted RBP23.75■■□□□ 1.39
SLX1A-204ENST00000563995 MRIQ9BWK5 157 aa23.75■■□□□ 1.39
SLX1A-204ENST00000563995 DEFB129Q9H1M3 183 aa23.75■■□□□ 1.39
SLX1A-204ENST00000563995 FKTNO75072 461 aa23.74■■□□□ 1.39
SLX1A-204ENST00000563995 CYP2E1P05181 493 aaPredicted RBP23.74■■□□□ 1.39
SLX1A-204ENST00000563995 ATP5JP18859 108 aa23.74■■□□□ 1.39
SLX1A-204ENST00000563995 CRKP46108 304 aa23.74■■□□□ 1.39
SLX1A-204ENST00000563995 DLGAP5Q15398 846 aa23.74■■□□□ 1.39
SLX1A-204ENST00000563995 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
SLX1A-204ENST00000563995 TBC1D9Q6ZT07 1266 aa23.74■■□□□ 1.39
SLX1A-204ENST00000563995 RBM5P52756 815 aaKnown RBP eCLIP23.73■■□□□ 1.39
SLX1A-204ENST00000563995 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
SLX1A-204ENST00000563995 TEKT1Q969V4 418 aa23.73■■□□□ 1.39
SLX1A-204ENST00000563995 GPATCH3Q96I76 525 aa23.73■■□□□ 1.39
SLX1A-204ENST00000563995 ECHDC1Q9NTX5 307 aa23.73■■□□□ 1.39
SLX1A-204ENST00000563995 PCDHAC2Q9Y5I4 1007 aa23.73■■□□□ 1.39
SLX1A-204ENST00000563995 SPDYE2BA6NHP3 402 aa23.72■■□□□ 1.39
SLX1A-204ENST00000563995 SPDYE6P0CI01 402 aa23.72■■□□□ 1.39
SLX1A-204ENST00000563995 NUCB1Q02818 461 aa23.72■■□□□ 1.39
SLX1A-204ENST00000563995 OTUD7AQ8TE49 926 aaPredicted RBP23.72■■□□□ 1.39
SLX1A-204ENST00000563995 PPP2R3BQ9Y5P8 575 aa23.72■■□□□ 1.39
SLX1A-204ENST00000563995 NDUFB9Q9Y6M9 179 aa23.72■■□□□ 1.39
SLX1A-204ENST00000563995 SALL3Q9BXA9 1300 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 MANSC4A6NHS7 340 aaPredicted RBP23.71■■□□□ 1.39
SLX1A-204ENST00000563995 ALDH1A1P00352 501 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 HHIPL2Q6UWX4 724 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 CHD1LQ86WJ1 897 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 DZIP1Q86YF9 867 aaKnown RBP23.71■■□□□ 1.39
SLX1A-204ENST00000563995 LNPKQ9C0E8 428 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 BOLA2Q9H3K6 86 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 COLQQ9Y215 455 aaPredicted RBP23.71■■□□□ 1.39
SLX1A-204ENST00000563995 HTTP42858 3142 aa23.71■■□□□ 1.39
SLX1A-204ENST00000563995 AOX1Q06278 1338 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 TTC41PQ6P2S7 1318 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 POTEFA5A3E0 1075 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 ZBTB48P10074 688 aaPredicted RBP23.7■■□□□ 1.38
SLX1A-204ENST00000563995 DIXDC1Q155Q3 683 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 IFNL1Q8IU54 200 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 CLMNQ96JQ2 1002 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 PRMT6Q96LA8 375 aaPredicted RBP23.7■■□□□ 1.38
SLX1A-204ENST00000563995 ZDHHC15Q96MV8 337 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 PIH1D3Q9NQM4 214 aaKnown RBP23.7■■□□□ 1.38
SLX1A-204ENST00000563995 LRP2BPQ9P2M1 347 aa23.7■■□□□ 1.38
SLX1A-204ENST00000563995 IGSF3O75054 1194 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 MX1P20591 662 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 MECOMQ03112 1051 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 TSHZ3Q63HK5 1081 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 WNK4Q96J92 1243 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 DNAJC2Q99543 621 aaKnown RBP23.69■■□□□ 1.38
SLX1A-204ENST00000563995 HAUS7Q99871 368 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 ANTXR1Q9H6X2 564 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 RAI14Q9P0K7 980 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 MAST2Q6P0Q8 1798 aa23.69■■□□□ 1.38
SLX1A-204ENST00000563995 IGF2BP3O00425 579 aaKnown RBP eCLIP23.68■■□□□ 1.38
SLX1A-204ENST00000563995 MYO1BO43795 1136 aa23.68■■□□□ 1.38
SLX1A-204ENST00000563995 INHBEP58166 350 aa23.68■■□□□ 1.38
SLX1A-204ENST00000563995 TTF1Q15361 905 aaPredicted RBP23.68■■□□□ 1.38
SLX1A-204ENST00000563995 SLF2Q8IX21 1173 aa23.68■■□□□ 1.38
SLX1A-204ENST00000563995 NSUN4Q96CB9 384 aaKnown RBP23.68■■□□□ 1.38
SLX1A-204ENST00000563995 SLC10A4Q96EP9 437 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms