RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CFHR5Q9BXR6 569 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 TMOD2Q9NZR1 351 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 AK9Q5TCS8 1911 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 MS4A1P11836 297 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 PI16Q6UXB8 463 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 IFNL1Q8IU54 200 aa19.76■□□□□ 0.75
LMX1B-204ENST00000561065 MYO5AQ9Y4I1 1855 aaKnown RBP19.75■□□□□ 0.75
LMX1B-204ENST00000561065 CCDC85CA6NKD9 419 aa19.75■□□□□ 0.75
LMX1B-204ENST00000561065 ITPRIPQ8IWB1 547 aa19.75■□□□□ 0.75
LMX1B-204ENST00000561065 FTSJ3Q8IY81 847 aaKnown RBP19.75■□□□□ 0.75
LMX1B-204ENST00000561065 OPTNQ96CV9 577 aa19.75■□□□□ 0.75
LMX1B-204ENST00000561065 AKAP2Q9Y2D5 859 aa19.75■□□□□ 0.75
LMX1B-204ENST00000561065 GAKO14976 1311 aa19.74■□□□□ 0.75
LMX1B-204ENST00000561065 GPR25O00155 361 aa19.74■□□□□ 0.75
LMX1B-204ENST00000561065 MVPQ14764 893 aaKnown RBP19.74■□□□□ 0.75
LMX1B-204ENST00000561065 CTU1Q7Z7A3 348 aaKnown RBP19.74■□□□□ 0.75
LMX1B-204ENST00000561065 SSH3Q8TE77 659 aa19.74■□□□□ 0.75
LMX1B-204ENST00000561065 ZNF384Q8TF68 577 aa19.74■□□□□ 0.75
LMX1B-204ENST00000561065 FAM198AQ9UFP1 575 aa19.74■□□□□ 0.75
LMX1B-204ENST00000561065 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
LMX1B-204ENST00000561065 ZBTB7BO15156 539 aaPredicted RBP19.73■□□□□ 0.75
LMX1B-204ENST00000561065 MAP3K9P80192 1104 aa19.73■□□□□ 0.75
LMX1B-204ENST00000561065 NOM1Q5C9Z4 860 aaKnown RBP19.73■□□□□ 0.75
LMX1B-204ENST00000561065 PTPN18Q99952 460 aa19.73■□□□□ 0.75
LMX1B-204ENST00000561065 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
LMX1B-204ENST00000561065 ATRNL1Q5VV63 1379 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 TESPA1A2RU30 521 aaPredicted RBP19.72■□□□□ 0.75
LMX1B-204ENST00000561065 ARID4AP29374 1257 aaPredicted RBP19.72■□□□□ 0.75
LMX1B-204ENST00000561065 TCP10Q12799 353 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 PANK1Q8TE04 598 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 FAM151AQ8WW52 585 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 MS4A4AQ96JQ5 239 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 NEUROD6Q96NK8 337 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 WRNIP1Q96S55 665 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 ABCF2Q9UG63 623 aa19.72■□□□□ 0.75
LMX1B-204ENST00000561065 ATP8B2P98198 1209 aa19.71■□□□□ 0.75
LMX1B-204ENST00000561065 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.75
LMX1B-204ENST00000561065 ZFPM1Q8IX07 1006 aa19.71■□□□□ 0.75
LMX1B-204ENST00000561065 ZGPATQ8N5A5 531 aaKnown RBP19.71■□□□□ 0.75
LMX1B-204ENST00000561065 ZKSCAN4Q969J2 545 aaPredicted RBP19.71■□□□□ 0.75
LMX1B-204ENST00000561065 CDK5RAP2Q96SN8 1893 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 SPDYE5A6NIY4 337 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 ALDH1A1P00352 501 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 MCAMP43121 646 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 INHBEP58166 350 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 MIGA2Q7L4E1 593 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
LMX1B-204ENST00000561065 BRI3BPQ8WY22 251 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 OTUD5Q96G74 571 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 USP40Q9NVE5 1235 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 CSADQ9Y600 493 aa19.7■□□□□ 0.74
LMX1B-204ENST00000561065 ZSWIM8A7E2V4 1837 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 INPP5BP32019 993 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 MECOMQ03112 1051 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 TNNI3KQ59H18 835 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 SPATA5Q8NB90 893 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 FPGT-TNNI3KV9GXZ4 949 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 MROH7-TTC4A0A0A0MT08 1334 aa19.69■□□□□ 0.74
LMX1B-204ENST00000561065 DOCK1Q14185 1865 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 CENPFP49454 3210 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 FKTNO75072 461 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 RGS3P49796 1198 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 CRHR2Q13324 411 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 CEP85Q6P2H3 762 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 TBC1D9Q6ZT07 1266 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 DBNDD2Q9BQY9 259 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 DDX4Q9NQI0 724 aaKnown RBP19.68■□□□□ 0.74
LMX1B-204ENST00000561065 SIPA1L1O43166 1804 aa19.68■□□□□ 0.74
LMX1B-204ENST00000561065 FOCADQ5VW36 1801 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 PHIPQ8WWQ0 1821 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 WDHD1O75717 1129 aaPredicted RBP19.67■□□□□ 0.74
LMX1B-204ENST00000561065 BTDP43251 543 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 SH3BP5LQ7L8J4 393 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 FAM163AQ96GL9 167 aaPredicted RBP19.67■□□□□ 0.74
LMX1B-204ENST00000561065 IDI2Q9BXS1 227 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 ZNF341Q9BYN7 854 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 CHMP4BQ9H444 224 aaKnown RBP19.67■□□□□ 0.74
LMX1B-204ENST00000561065 GPR108Q9NPR9 543 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 NOP58Q9Y2X3 529 aaKnown RBP19.67■□□□□ 0.74
LMX1B-204ENST00000561065 PTPRFP10586 1907 aa19.67■□□□□ 0.74
LMX1B-204ENST00000561065 TNRC18O15417 2968 aaPredicted RBP19.66■□□□□ 0.74
LMX1B-204ENST00000561065 CCL15-CCL14A0A0B4J2E2 113 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 SURF6O75683 361 aaKnown RBP19.66■□□□□ 0.74
LMX1B-204ENST00000561065 SLURP2P0DP57 97 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 RHBDL3P58872 404 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 CAP1Q01518 475 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 CCL15Q16663 113 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 GORABQ5T7V8 394 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 ERICH6Q7L0X2 663 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 NSUN4Q96CB9 384 aaKnown RBP19.66■□□□□ 0.74
LMX1B-204ENST00000561065 HOOK2Q96ED9 719 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 TLR7Q9NYK1 1049 aaKnown RBP19.66■□□□□ 0.74
LMX1B-204ENST00000561065 ZNF112Q9UJU3 913 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 HPS5Q9UPZ3 1129 aa19.66■□□□□ 0.74
LMX1B-204ENST00000561065 IRF6O14896 467 aa19.65■□□□□ 0.74
LMX1B-204ENST00000561065 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
LMX1B-204ENST00000561065 SPTY2D1Q68D10 685 aaPredicted RBP19.65■□□□□ 0.74
LMX1B-204ENST00000561065 ERO1BQ86YB8 467 aa19.65■□□□□ 0.74
LMX1B-204ENST00000561065 FAM43AQ8N2R8 423 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms