RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 BIN2Q9UBW5 565 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-224ENST00000557024 SRRDQ9UH36 339 aa11.88□□□□□ -0.51
SYNE2-224ENST00000557024 CPA4Q9UI42 421 aa11.88□□□□□ -0.51
SYNE2-224ENST00000557024 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
SYNE2-224ENST00000557024 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
SYNE2-224ENST00000557024 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
SYNE2-224ENST00000557024 OTOFQ9HC10 1997 aa11.88□□□□□ -0.51
SYNE2-224ENST00000557024 ZSWIM8A7E2V4 1837 aa11.88□□□□□ -0.51
SYNE2-224ENST00000557024 IRF6O14896 467 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 FARP2O94887 1054 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-224ENST00000557024 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-224ENST00000557024 OSBPP22059 807 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 G2E3Q7L622 706 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
SYNE2-224ENST00000557024 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-224ENST00000557024 WRNIP1Q96S55 665 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
SYNE2-224ENST00000557024 PLIN1O60240 522 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 CRKP46108 304 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 TNNI2P48788 182 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 CACNB3P54284 484 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
SYNE2-224ENST00000557024 C17orf99Q6UX52 265 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
SYNE2-224ENST00000557024 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
SYNE2-224ENST00000557024 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 A0A1W2PPC1 479 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 APAF1O14727 1248 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 EVI5O60447 810 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 HOXD10P28358 340 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 IFIT5Q13325 482 aaKnown RBP11.85□□□□□ -0.51
SYNE2-224ENST00000557024 PPIL2Q13356 520 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.85□□□□□ -0.51
SYNE2-224ENST00000557024 U2AF1L4Q8WU68 220 aaKnown RBP11.85□□□□□ -0.51
SYNE2-224ENST00000557024 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 ECM29Q5VYK3 1845 aa11.85□□□□□ -0.51
SYNE2-224ENST00000557024 PDHXO00330 501 aa11.84□□□□□ -0.51
SYNE2-224ENST00000557024 GYG1P46976 350 aa11.84□□□□□ -0.51
SYNE2-224ENST00000557024 UBXN2AP68543 259 aa11.84□□□□□ -0.51
SYNE2-224ENST00000557024 PRKCZQ05513 592 aa11.84□□□□□ -0.51
SYNE2-224ENST00000557024 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
SYNE2-224ENST00000557024 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
SYNE2-224ENST00000557024 ZNF594Q96JF6 807 aaPredicted RBP11.84□□□□□ -0.51
SYNE2-224ENST00000557024 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
SYNE2-224ENST00000557024 FOXO4P98177 505 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 GRIK5Q16478 980 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 ANKRD23Q86SG2 305 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 TSR2Q969E8 191 aaKnown RBP11.83□□□□□ -0.52
SYNE2-224ENST00000557024 DCBLD2Q96PD2 775 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 MYH3P11055 1940 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 ADGRA2Q96PE1 1338 aa11.83□□□□□ -0.52
SYNE2-224ENST00000557024 SGPL1O95470 568 aa11.82□□□□□ -0.52
SYNE2-224ENST00000557024 HIBADHP31937 336 aaKnown RBP11.82□□□□□ -0.52
SYNE2-224ENST00000557024 TAF7LQ5H9L4 462 aa11.82□□□□□ -0.52
SYNE2-224ENST00000557024 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
SYNE2-224ENST00000557024 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
SYNE2-224ENST00000557024 SLAIN1Q8ND83 568 aa11.82□□□□□ -0.52
SYNE2-224ENST00000557024 LINS1Q8NG48 757 aa11.82□□□□□ -0.52
SYNE2-224ENST00000557024 PRKRIP1Q9H875 184 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-224ENST00000557024 TFRCP02786 760 aaKnown RBP11.81□□□□□ -0.52
SYNE2-224ENST00000557024 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-224ENST00000557024 INPP5BP32019 993 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 PSEN1P49768 467 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 FCGRTP55899 365 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 PPATQ06203 517 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 FLIIQ13045 1269 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-224ENST00000557024 LMBR1LQ6UX01 489 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 Q7L0L9 218 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 MIGA2Q7L4E1 593 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-224ENST00000557024 TMOD2Q9NZR1 351 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 GABRQQ9UN88 632 aa11.81□□□□□ -0.52
SYNE2-224ENST00000557024 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-224ENST00000557024 INHAP05111 366 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 CYP2C8P10632 490 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 ELNP15502 786 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 CHAF1AQ13111 956 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-224ENST00000557024 MOGSQ13724 837 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 CCDC57Q2TAC2 916 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-224ENST00000557024 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 DCAF15Q66K64 600 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 TEKT1Q969V4 418 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 HOOK2Q96ED9 719 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 DEFB118Q96PH6 123 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 ZNF341Q9BYN7 854 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
SYNE2-224ENST00000557024 MAP3K13O43283 966 aa11.79□□□□□ -0.52
SYNE2-224ENST00000557024 ADCY3O60266 1144 aa11.79□□□□□ -0.52
SYNE2-224ENST00000557024 BCRP11274 1271 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms