RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
SHMT2-213ENST00000554600 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
SHMT2-213ENST00000554600 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
SHMT2-213ENST00000554600 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-213ENST00000554600 SNRKQ9NRH2 765 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 HMG20BQ9P0W2 317 aa13.09□□□□□ -0.31
SHMT2-213ENST00000554600 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
SHMT2-213ENST00000554600 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
SHMT2-213ENST00000554600 ARID4AP29374 1257 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-213ENST00000554600 MCAMP43121 646 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 TBC1D9Q6ZT07 1266 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 AACSQ86V21 672 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 SLC10A4Q96EP9 437 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 LRP2BPQ9P2M1 347 aa13.08□□□□□ -0.32
SHMT2-213ENST00000554600 MYH7P12883 1935 aa13.07□□□□□ -0.32
SHMT2-213ENST00000554600 TCP10Q12799 353 aa13.07□□□□□ -0.32
SHMT2-213ENST00000554600 CDC42EP5Q6NZY7 148 aa13.07□□□□□ -0.32
SHMT2-213ENST00000554600 IL1RAPL2Q9NP60 686 aa13.07□□□□□ -0.32
SHMT2-213ENST00000554600 TLR7Q9NYK1 1049 aaKnown RBP13.07□□□□□ -0.32
SHMT2-213ENST00000554600 MYH1P12882 1939 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 CA12O43570 354 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 USP2O75604 605 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-213ENST00000554600 LDHCP07864 332 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 GSTO1P78417 241 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 MECOMQ03112 1051 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 LDLRAD1Q5T700 205 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-213ENST00000554600 CLMNQ96JQ2 1002 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 TEPSINQ96N21 525 aa13.06□□□□□ -0.32
SHMT2-213ENST00000554600 DBNLQ9UJU6 430 aaKnown RBP13.06□□□□□ -0.32
SHMT2-213ENST00000554600 LAMB1P07942 1786 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 FOCADQ5VW36 1801 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 ZBTB22O15209 634 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 TRPA1O75762 1119 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 BTDP43251 543 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 HOOK2Q96ED9 719 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 KIF1BPQ96EK5 621 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
SHMT2-213ENST00000554600 MROH7-TTC4A0A0A0MT08 1334 aa13.05□□□□□ -0.32
SHMT2-213ENST00000554600 ZAP70P43403 619 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
SHMT2-213ENST00000554600 NFIAQ12857 509 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 PICALMQ13492 652 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-213ENST00000554600 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-213ENST00000554600 CLASRPQ8N2M8 674 aaKnown RBP13.04□□□□□ -0.32
SHMT2-213ENST00000554600 FAM151AQ8WW52 585 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 GAKO14976 1311 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
SHMT2-213ENST00000554600 RAB11FIP3O75154 756 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
SHMT2-213ENST00000554600 RGS3P49796 1198 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 SREBF2Q12772 1141 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 NSUN4Q96CB9 384 aaKnown RBP13.03□□□□□ -0.32
SHMT2-213ENST00000554600 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 RNF186Q9NXI6 227 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 CSADQ9Y600 493 aa13.03□□□□□ -0.32
SHMT2-213ENST00000554600 RPAP1Q9BWH6 1393 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-213ENST00000554600 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
SHMT2-213ENST00000554600 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-213ENST00000554600 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
SHMT2-213ENST00000554600 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-213ENST00000554600 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-213ENST00000554600 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-213ENST00000554600 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
SHMT2-213ENST00000554600 FAM198AQ9UFP1 575 aa13.02□□□□□ -0.33
SHMT2-213ENST00000554600 NDUFB9Q9Y6M9 179 aa13.02□□□□□ -0.33
SHMT2-213ENST00000554600 DOCK1Q14185 1865 aa13.02□□□□□ -0.33
SHMT2-213ENST00000554600 GPR75-ASB3A0A0A6YYF3 556 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 UNCXA6NJT0 531 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-213ENST00000554600 RGS19P49795 217 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 VGLL4Q14135 290 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-213ENST00000554600 ZFPM1Q8IX07 1006 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 ZNF384Q8TF68 577 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 ZNF341Q9BYN7 854 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 PIH1D3Q9NQM4 214 aaKnown RBP13.01□□□□□ -0.33
SHMT2-213ENST00000554600 SAGE1Q9NXZ1 904 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 MYH8P13535 1937 aa13.01□□□□□ -0.33
SHMT2-213ENST00000554600 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms