RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 LPIN2Q92539 896 aa18.69■□□□□ 0.58
CAPN1-219ENST00000530495 E9PSI1 815 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 GNRH1P01148 92 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 SLC5A1P13866 664 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-219ENST00000530495 LACTBP83111 547 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-219ENST00000530495 KIF22Q14807 665 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 HABP4Q5JVS0 413 aaKnown RBP18.68■□□□□ 0.58
CAPN1-219ENST00000530495 MIGA2Q7L4E1 593 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 ATG9AQ7Z3C6 839 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 FAM151AQ8WW52 585 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 ZNF341Q9BYN7 854 aa18.68■□□□□ 0.58
CAPN1-219ENST00000530495 MKI67P46013 3256 aaKnown RBP18.68■□□□□ 0.58
CAPN1-219ENST00000530495 ARHGAP39Q9C0H5 1083 aa18.67■□□□□ 0.58
CAPN1-219ENST00000530495 ZNF112Q9UJU3 913 aa18.67■□□□□ 0.58
CAPN1-219ENST00000530495 INPP5BP32019 993 aa18.66■□□□□ 0.58
CAPN1-219ENST00000530495 PRMT2P55345 433 aa18.66■□□□□ 0.58
CAPN1-219ENST00000530495 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
CAPN1-219ENST00000530495 CDC42EP5Q6NZY7 148 aa18.66■□□□□ 0.58
CAPN1-219ENST00000530495 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
CAPN1-219ENST00000530495 ZSWIM8A7E2V4 1837 aa18.65■□□□□ 0.58
CAPN1-219ENST00000530495 SLC4A8Q2Y0W8 1093 aa18.65■□□□□ 0.58
CAPN1-219ENST00000530495 ALDH1L2Q3SY69 923 aa18.65■□□□□ 0.58
CAPN1-219ENST00000530495 C17orf99Q6UX52 265 aa18.65■□□□□ 0.58
CAPN1-219ENST00000530495 DAGLAQ9Y4D2 1042 aa18.65■□□□□ 0.58
CAPN1-219ENST00000530495 AK9Q5TCS8 1911 aa18.64■□□□□ 0.58
CAPN1-219ENST00000530495 CIAO1O76071 339 aa18.64■□□□□ 0.57
CAPN1-219ENST00000530495 TCP10Q12799 353 aa18.64■□□□□ 0.57
CAPN1-219ENST00000530495 ANKRD23Q86SG2 305 aa18.64■□□□□ 0.57
CAPN1-219ENST00000530495 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-219ENST00000530495 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
CAPN1-219ENST00000530495 DIXDC1Q155Q3 683 aa18.63■□□□□ 0.57
CAPN1-219ENST00000530495 SH3TC2Q8TF17 1288 aa18.63■□□□□ 0.57
CAPN1-219ENST00000530495 GNL3LQ9NVN8 582 aaKnown RBP18.63■□□□□ 0.57
CAPN1-219ENST00000530495 CEP126Q9P2H0 1117 aa18.63■□□□□ 0.57
CAPN1-219ENST00000530495 PDHXO00330 501 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 ZBTB22O15209 634 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 LDHBP07195 334 aaKnown RBP18.62■□□□□ 0.57
CAPN1-219ENST00000530495 PRDX5P30044 214 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 NFIAQ12857 509 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 ATP2B3Q16720 1220 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 NOL9Q5SY16 702 aaKnown RBP18.62■□□□□ 0.57
CAPN1-219ENST00000530495 USP40Q9NVE5 1235 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 FAM198AQ9UFP1 575 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
CAPN1-219ENST00000530495 SEMA3EO15041 775 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-219ENST00000530495 CTGFP29279 349 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 MOGSQ13724 837 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 SIL1Q9H173 461 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 CPA4Q9UI42 421 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 DENND2AQ9ULE3 1009 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 BRCA2P51587 3418 aa18.61■□□□□ 0.57
CAPN1-219ENST00000530495 ADGRA2Q96PE1 1338 aa18.6■□□□□ 0.57
CAPN1-219ENST00000530495 MYCP01106 439 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-219ENST00000530495 PSMC4P43686 418 aa18.6■□□□□ 0.57
CAPN1-219ENST00000530495 ZFPM1Q8IX07 1006 aa18.6■□□□□ 0.57
CAPN1-219ENST00000530495 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
CAPN1-219ENST00000530495 TRIM47Q96LD4 638 aa18.6■□□□□ 0.57
CAPN1-219ENST00000530495 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
CAPN1-219ENST00000530495 SRRDQ9UH36 339 aa18.6■□□□□ 0.57
CAPN1-219ENST00000530495 CXCL11O14625 94 aa18.59■□□□□ 0.57
CAPN1-219ENST00000530495 HOXD10P28358 340 aa18.59■□□□□ 0.57
CAPN1-219ENST00000530495 IL15P40933 162 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-219ENST00000530495 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
CAPN1-219ENST00000530495 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
CAPN1-219ENST00000530495 MYH2Q9UKX2 1941 aa18.59■□□□□ 0.57
CAPN1-219ENST00000530495 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.56
CAPN1-219ENST00000530495 OSBPP22059 807 aa18.58■□□□□ 0.56
CAPN1-219ENST00000530495 PHKA1P46020 1223 aa18.58■□□□□ 0.56
CAPN1-219ENST00000530495 IDI2Q9BXS1 227 aa18.58■□□□□ 0.56
CAPN1-219ENST00000530495 ENTPD3O75355 529 aa18.57■□□□□ 0.56
CAPN1-219ENST00000530495 FMNL1O95466 1100 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-219ENST00000530495 MAP3K10Q02779 954 aa18.57■□□□□ 0.56
CAPN1-219ENST00000530495 GPAT2Q6NUI2 795 aa18.57■□□□□ 0.56
CAPN1-219ENST00000530495 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
CAPN1-219ENST00000530495 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
CAPN1-219ENST00000530495 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
CAPN1-219ENST00000530495 ECM2O94769 699 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-219ENST00000530495 RGS3P49796 1198 aa18.56■□□□□ 0.56
CAPN1-219ENST00000530495 CCDC102BQ68D86 513 aa18.56■□□□□ 0.56
CAPN1-219ENST00000530495 FAM163AQ96GL9 167 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-219ENST00000530495 PARK7Q99497 189 aaKnown RBP18.56■□□□□ 0.56
CAPN1-219ENST00000530495 COLQQ9Y215 455 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-219ENST00000530495 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
CAPN1-219ENST00000530495 ATRNL1Q5VV63 1379 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 GAKO14976 1311 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 CT47B1P0C2W7 299 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-219ENST00000530495 BCRP11274 1271 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 GRK4P32298 578 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 FXR1P51114 621 aaKnown RBP eCLIP18.55■□□□□ 0.56
CAPN1-219ENST00000530495 MTFR1Q15390 333 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 FASTKD5Q7L8L6 764 aaKnown RBP18.55■□□□□ 0.56
CAPN1-219ENST00000530495 SCYL3Q8IZE3 742 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 RAET1EQ8TD07 263 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
CAPN1-219ENST00000530495 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
CAPN1-219ENST00000530495 ZHX2Q9Y6X8 837 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 DOCK2Q92608 1830 aa18.55■□□□□ 0.56
CAPN1-219ENST00000530495 MGAMO43451 1857 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms