RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 FGFR2P21802 821 aa15.11■□□□□ 0.01
USH1C-208ENST00000529563 GCC1Q96CN9 775 aa15.11■□□□□ 0.01
USH1C-208ENST00000529563 SNCAIPQ9Y6H5 919 aa15.11■□□□□ 0.01
USH1C-208ENST00000529563 ECM2O94769 699 aaPredicted RBP15.1■□□□□ 0.01
USH1C-208ENST00000529563 MYCP01106 439 aaPredicted RBP15.1■□□□□ 0.01
USH1C-208ENST00000529563 PPIL2Q13356 520 aa15.1■□□□□ 0.01
USH1C-208ENST00000529563 FAM151AQ8WW52 585 aa15.1■□□□□ 0.01
USH1C-208ENST00000529563 API5Q9BZZ5 524 aaKnown RBP15.1■□□□□ 0.01
USH1C-208ENST00000529563 LAMB1P07942 1786 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 IRF6O14896 467 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 RFX5P48382 616 aaPredicted RBP15.09■□□□□ 0.01
USH1C-208ENST00000529563 PPATQ06203 517 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 ARMC5Q96C12 935 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 USP40Q9NVE5 1235 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 FBXO3Q9UK99 471 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 DENND2AQ9ULE3 1009 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 NOB1Q9ULX3 412 aaKnown RBP15.09■□□□□ 0.01
USH1C-208ENST00000529563 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 LRRFIP2Q9Y608 721 aaKnown RBP15.09■□□□□ 0.01
USH1C-208ENST00000529563 PTCH2Q9Y6C5 1203 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 MYH13Q9UKX3 1938 aa15.09■□□□□ 0.01
USH1C-208ENST00000529563 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
USH1C-208ENST00000529563 AK9Q5TCS8 1911 aa15.08■□□□□ 0
USH1C-208ENST00000529563 BTBD19C9JJ37 291 aa15.08■□□□□ 0
USH1C-208ENST00000529563 TLR2O60603 784 aa15.08■□□□□ 0
USH1C-208ENST00000529563 CIAO1O76071 339 aa15.08■□□□□ 0
USH1C-208ENST00000529563 EN2P19622 333 aaPredicted RBP15.08■□□□□ 0
USH1C-208ENST00000529563 PRDX5P30044 214 aa15.08■□□□□ 0
USH1C-208ENST00000529563 IL15P40933 162 aaPredicted RBP15.08■□□□□ 0
USH1C-208ENST00000529563 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
USH1C-208ENST00000529563 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
USH1C-208ENST00000529563 DZIP1Q86YF9 867 aaKnown RBP15.08■□□□□ 0
USH1C-208ENST00000529563 ZSCAN29Q8IWY8 852 aaPredicted RBP15.08■□□□□ 0
USH1C-208ENST00000529563 ZGPATQ8N5A5 531 aaKnown RBP15.08■□□□□ 0
USH1C-208ENST00000529563 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.08■□□□□ 0
USH1C-208ENST00000529563 ZCCHC17Q9NP64 241 aaKnown RBP15.08■□□□□ 0
USH1C-208ENST00000529563 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
USH1C-208ENST00000529563 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
USH1C-208ENST00000529563 INPP5BP32019 993 aa15.07■□□□□ 0
USH1C-208ENST00000529563 SLF2Q8IX21 1173 aa15.07■□□□□ 0
USH1C-208ENST00000529563 SEMA3EO15041 775 aa15.06■□□□□ 0
USH1C-208ENST00000529563 HOXD10P28358 340 aa15.06■□□□□ 0
USH1C-208ENST00000529563 LACTBP83111 547 aaPredicted RBP15.06■□□□□ 0
USH1C-208ENST00000529563 ZNF333Q96JL9 665 aa15.06■□□□□ 0
USH1C-208ENST00000529563 PICK1Q9NRD5 415 aa15.06■□□□□ 0
USH1C-208ENST00000529563 ABCF2Q9UG63 623 aa15.06■□□□□ 0
USH1C-208ENST00000529563 CPA4Q9UI42 421 aa15.06■□□□□ 0
USH1C-208ENST00000529563 PA2G4Q9UQ80 394 aaKnown RBP15.06■□□□□ 0
USH1C-208ENST00000529563 PDHXO00330 501 aa15.05■□□□□ -0
USH1C-208ENST00000529563 FMNL1O95466 1100 aaPredicted RBP15.05■□□□□ -0
USH1C-208ENST00000529563 GNRH1P01148 92 aa15.05■□□□□ -0
USH1C-208ENST00000529563 PHKA1P46020 1223 aa15.05■□□□□ -0
USH1C-208ENST00000529563 NFIAQ12857 509 aa15.05■□□□□ -0
USH1C-208ENST00000529563 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ -0
USH1C-208ENST00000529563 ARHGAP39Q9C0H5 1083 aa15.05■□□□□ -0
USH1C-208ENST00000529563 PRMT2P55345 433 aa15.04■□□□□ -0
USH1C-208ENST00000529563 CAP1Q01518 475 aa15.04■□□□□ -0
USH1C-208ENST00000529563 GORABQ5T7V8 394 aa15.04■□□□□ -0
USH1C-208ENST00000529563 CCDC102BQ68D86 513 aa15.04■□□□□ -0
USH1C-208ENST00000529563 ANKRD23Q86SG2 305 aa15.04■□□□□ -0
USH1C-208ENST00000529563 RAET1EQ8TD07 263 aa15.04■□□□□ -0
USH1C-208ENST00000529563 SH3TC2Q8TF17 1288 aa15.04■□□□□ -0
USH1C-208ENST00000529563 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
USH1C-208ENST00000529563 BIN2Q9UBW5 565 aaPredicted RBP15.04■□□□□ -0
USH1C-208ENST00000529563 AKAP2Q9Y2D5 859 aa15.04■□□□□ -0
USH1C-208ENST00000529563 SALL1Q9NSC2 1324 aa15.03■□□□□ -0
USH1C-208ENST00000529563 GNAI3P08754 354 aa15.03■□□□□ -0
USH1C-208ENST00000529563 ADORA1P30542 326 aa15.03■□□□□ -0
USH1C-208ENST00000529563 PSMC4P43686 418 aa15.03■□□□□ -0
USH1C-208ENST00000529563 RGS3P49796 1198 aa15.03■□□□□ -0
USH1C-208ENST00000529563 PICALMQ13492 652 aa15.03■□□□□ -0
USH1C-208ENST00000529563 NEUROD6Q96NK8 337 aa15.03■□□□□ -0
USH1C-208ENST00000529563 PARK7Q99497 189 aaKnown RBP15.03■□□□□ -0
USH1C-208ENST00000529563 MEIS3Q99687 375 aa15.03■□□□□ -0
USH1C-208ENST00000529563 KIAA0100Q14667 2235 aaKnown RBP15.02■□□□□ -0
USH1C-208ENST00000529563 SRGAP3O43295 1099 aa15.02■□□□□ -0
USH1C-208ENST00000529563 MVPQ14764 893 aaKnown RBP15.02■□□□□ -0
USH1C-208ENST00000529563 GADL1Q6ZQY3 521 aa15.02■□□□□ -0
USH1C-208ENST00000529563 COPRSQ9NQ92 184 aa15.02■□□□□ -0
USH1C-208ENST00000529563 FAM198AQ9UFP1 575 aa15.02■□□□□ -0
USH1C-208ENST00000529563 ZNF112Q9UJU3 913 aa15.02■□□□□ -0
USH1C-208ENST00000529563 ZBED9Q6R2W3 1325 aa15.01□□□□□ -0.01
USH1C-208ENST00000529563 ENTPD3O75355 529 aa15.01□□□□□ -0.01
USH1C-208ENST00000529563 TIMM10P62072 90 aa15.01□□□□□ -0.01
USH1C-208ENST00000529563 NOL9Q5SY16 702 aaKnown RBP15.01□□□□□ -0.01
USH1C-208ENST00000529563 ERICH6Q7L0X2 663 aa15.01□□□□□ -0.01
USH1C-208ENST00000529563 FASTKD5Q7L8L6 764 aaKnown RBP15.01□□□□□ -0.01
USH1C-208ENST00000529563 KCNH4Q9UQ05 1017 aa15.01□□□□□ -0.01
USH1C-208ENST00000529563 ZHX2Q9Y6X8 837 aa15.01□□□□□ -0.01
USH1C-208ENST00000529563 MYPNQ86TC9 1320 aa15□□□□□ -0.01
USH1C-208ENST00000529563 A0A1B0GUL7 405 aa15□□□□□ -0.01
USH1C-208ENST00000529563 CXCL11O14625 94 aa15□□□□□ -0.01
USH1C-208ENST00000529563 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
USH1C-208ENST00000529563 BTDP43251 543 aa15□□□□□ -0.01
USH1C-208ENST00000529563 FCGRTP55899 365 aa15□□□□□ -0.01
USH1C-208ENST00000529563 TFCP2Q12800 502 aa15□□□□□ -0.01
USH1C-208ENST00000529563 RASGRF1Q13972 1273 aa15□□□□□ -0.01
USH1C-208ENST00000529563 C17orf99Q6UX52 265 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms