RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 IQCA1LA6NCM1 817 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 USP17L3A6NCW0 530 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 USP17L4A6NCW7 530 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 IFIT1P09914 478 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 MCCP23508 829 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 GYG1P46976 350 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 SCNN1DP51172 638 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 TIMM10P62072 90 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 TFCP2Q12800 502 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 PUM3Q15397 648 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 CAVIN4Q5BKX8 364 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 PPP1R15BQ5SWA1 713 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 STRIP1Q5VSL9 837 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 TTLL5Q6EMB2 1281 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 USP17L1Q7RTZ2 530 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 ZNF804AQ7Z570 1209 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 TDRD7Q8NHU6 1098 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 DPF2Q92785 391 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 GLMNQ92990 594 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.71□□□□□ -1.18
ATPAF1-209ENST00000529214 HMMRO75330 724 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 PTMAP06454 111 aaKnown RBP7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 SLC5A1P13866 664 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 RPS12P25398 132 aaKnown RBP7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 EPS15P42566 896 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 BCAMP50895 628 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 GTF2IP78347 998 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 ATP2B3Q16720 1220 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 DACT2Q5SW24 774 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 CRBNQ96SW2 442 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 GMLQ99445 158 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 TAF1DQ9H5J8 278 aaPredicted RBP7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 GPR108Q9NPR9 543 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 HACL1Q9UJ83 578 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 SPEF2Q9C093 1822 aa7.7□□□□□ -1.18
ATPAF1-209ENST00000529214 A0A1B0GUL7 405 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 TOMM70O94826 608 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 EPHX2P34913 555 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 GMPSP49915 693 aaPredicted RBP7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 RSBN1LQ6PCB5 846 aaPredicted RBP7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 VPS37DQ86XT2 251 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 BANK1Q8NDB2 785 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 AGBL3Q8NEM8 1001 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 GPRC5DQ9NZD1 345 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 CNOT7Q9UIV1 285 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 PCDHB15Q9Y5E8 787 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 TIAM2Q8IVF5 1701 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 WDR90Q96KV7 1748 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 FAM205AQ6ZU69 1335 aa7.69□□□□□ -1.18
ATPAF1-209ENST00000529214 RBM47A0AV96 593 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 H7C1D1 291 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 FECHP22830 423 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 FKBP1AP62942 108 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 OS9Q13438 667 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 HSP90AB4PQ58FF6 505 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 USP50Q70EL3 339 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 PNMA8AQ86V59 439 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 C16orf71Q8IYS4 520 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 PROCA1Q8NCQ7 364 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 RNF166Q96A37 237 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 XAGE2Q96GT9 111 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 NEUROD6Q96NK8 337 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 REPIN1Q9BWE0 567 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 SNRKQ9NRH2 765 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 ADARB2Q9NS39 739 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 EXOC6BQ9Y2D4 811 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 MYO3BQ8WXR4 1341 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 SHTN1A0MZ66 631 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 RAB11FIP3O75154 756 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 ADORA1P30542 326 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 MMP14P50281 582 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 TNNI3KQ59H18 835 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 ERC1Q8IUD2 1116 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 MICALL2Q8IY33 904 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 MXD3Q9BW11 206 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 DCTPP1Q9H773 170 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 EMILIN3Q9NT22 766 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 FPGT-TNNI3KV9GXZ4 949 aa7.68□□□□□ -1.18
ATPAF1-209ENST00000529214 FRAT2O75474 233 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 PHKA1P46020 1223 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 HIRAP54198 1017 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 ZNF280AP59817 542 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 CERS5Q8N5B7 392 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 EXOC6Q8TAG9 804 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 RBM46Q8TBY0 533 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 RHPN1Q8TCX5 695 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 EAF2Q96CJ1 260 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 KIF1BPQ96EK5 621 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 GNL3LQ9NVN8 582 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 PGAP2Q9UHJ9 254 aa7.67□□□□□ -1.18
ATPAF1-209ENST00000529214 ZNF609O15014 1411 aa7.66□□□□□ -1.18
ATPAF1-209ENST00000529214 A0A1B0GUL6 1792 aa7.66□□□□□ -1.18
ATPAF1-209ENST00000529214 SCN9AQ15858 1988 aa7.66□□□□□ -1.18
ATPAF1-209ENST00000529214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms