RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 DEFB129Q9H1M3 183 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 PODXL2Q9NZ53 605 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 CPA4Q9UI42 421 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 PCDHAC2Q9Y5I4 1007 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 TEX15Q9BXT5 2789 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 TRIM43BA6NCK2 446 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 HOXD10P28358 340 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 ID4P47928 161 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 GTF2A2P52657 109 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 GRAPQ13588 217 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 SNX17Q15036 470 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 MTHFSDQ2M296 383 aaKnown RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 BMP8AQ7Z5Y6 402 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 PPARGC1BQ86YN6 1023 aaKnown RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 LURAP1LQ8IV03 231 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 FAM178BQ8IXR5 827 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZBTB38Q8NAP3 1195 aaPredicted RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 GRAPLQ8TC17 118 aaPredicted RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 CELF1Q92879 486 aaKnown RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 BADQ92934 168 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 TRIM43Q96BQ3 446 aaPredicted RBP3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 NYXQ9GZU5 481 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
RNU1-48P-201ENST00000516400 SPEF2Q9C093 1822 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZNF804BA4D1E1 1349 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 GAKO14976 1311 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 SPDYE5A6NIY4 337 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 IRF6O14896 467 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 NPHP1O15259 732 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 SASH1O94885 1247 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 IL13P35225 146 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 VGLL4Q14135 290 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 KIF22Q14807 665 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 TTLL7Q6ZT98 887 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 L3MBTL2Q969R5 705 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 RMDN1Q96DB5 314 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 NLRP3Q96P20 1036 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 ELP3Q9H9T3 547 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 PLSCR2Q9NRY7 297 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZNF652Q9Y2D9 606 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 MTCH2Q9Y6C9 303 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 SNCAIPQ9Y6H5 919 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 OTOGLQ3ZCN5 2332 aa3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZNFX1Q9P2E3 1918 aaKnown RBP3.31□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZNF236Q9UL36 1845 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 COL4A3Q01955 1670 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 CFAP46Q8IYW2 2715 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 MAP3K15Q6ZN16 1313 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 PRR23AA6NEV1 266 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 C19orf67A6NJJ6 358 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 GRXCR1A8MXD5 290 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 PPP1R12BO60237 982 aaPredicted RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 FMNL1O95466 1100 aaPredicted RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 NF2P35240 595 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 MMP14P50281 582 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 SF3B3Q15393 1217 aaKnown RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 C1orf141Q5JVX7 400 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 C1orf53Q5VUE5 145 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 TMC4Q7Z404 712 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 ANKRD23Q86SG2 305 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 APOBEC3FQ8IUX4 373 aaKnown RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 HERVK_113Q902F9 699 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 TIFAQ96CG3 184 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 VWCEQ96DN2 955 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 PRMT6Q96LA8 375 aaPredicted RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 DLL3Q9NYJ7 618 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 NSFL1CQ9UNZ2 370 aaKnown RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 KCNH4Q9UQ05 1017 aa3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZNF330Q9Y3S2 320 aaPredicted RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 ANKRD17O75179 2603 aaKnown RBP3.3□□□□□ -1.88
RNU1-48P-201ENST00000516400 MYO10Q9HD67 2058 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 DLG5Q8TDM6 1919 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 RPAP1Q9BWH6 1393 aaPredicted RBP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 USP17L3A6NCW0 530 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 USP17L4A6NCW7 530 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 PITPNM1O00562 1244 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 ZBTB22O15209 634 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 LPXNO60711 386 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 ALADP13716 330 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 NBL1P41271 181 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 TNNT2P45379 298 aaPredicted RBP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 IREB2P48200 963 aaKnown RBP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 FXR2P51116 673 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 PTPN5P54829 565 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 AAK1Q2M2I8 961 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 SULT6B1Q6IMI4 303 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 GIGYF2Q6Y7W6 1299 aaKnown RBP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 USP17L1Q7RTZ2 530 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 TXNRD3Q86VQ6 643 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 GJD3Q8N144 294 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 CRACR2BQ8N4Y2 399 aaPredicted RBP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 CERS5Q8N5B7 392 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 TRIB2Q92519 343 aa3.29□□□□□ -1.88
RNU1-48P-201ENST00000516400 USP6NLQ92738 828 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms