RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 SIL1Q9H173 461 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 NOB1Q9ULX3 412 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 SNCAIPQ9Y6H5 919 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 IRF6O14896 467 aa14.53□□□□□ -0.08
RAPGEF3-213ENST00000494764 LDHBP07195 334 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-213ENST00000494764 ATP2B3Q16720 1220 aa14.53□□□□□ -0.08
RAPGEF3-213ENST00000494764 ARMC5Q96C12 935 aa14.53□□□□□ -0.08
RAPGEF3-213ENST00000494764 PCDH10Q9P2E7 1040 aa14.53□□□□□ -0.08
RAPGEF3-213ENST00000494764 KIAA0100Q14667 2235 aaKnown RBP14.52□□□□□ -0.08
RAPGEF3-213ENST00000494764 BTBD19C9JJ37 291 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 TLR2O60603 784 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 CIAO1O76071 339 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 CAP1Q01518 475 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 PPATQ06203 517 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 TCP10Q12799 353 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 PPIL2Q13356 520 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 SLC9C1Q4G0N8 1177 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 CDC42EP5Q6NZY7 148 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 ZCCHC17Q9NP64 241 aaKnown RBP14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 USP40Q9NVE5 1235 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 DENND2AQ9ULE3 1009 aa14.52□□□□□ -0.09
RAPGEF3-213ENST00000494764 MKI67P46013 3256 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 EN2P19622 333 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 IL15P40933 162 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 DIXDC1Q155Q3 683 aa14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 TRMT2AQ8IZ69 625 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 GCC1Q96CN9 775 aa14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 API5Q9BZZ5 524 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 DAGLAQ9Y4D2 1042 aa14.51□□□□□ -0.09
RAPGEF3-213ENST00000494764 PRDX5P30044 214 aa14.5□□□□□ -0.09
RAPGEF3-213ENST00000494764 INPP5BP32019 993 aa14.5□□□□□ -0.09
RAPGEF3-213ENST00000494764 LRRFIP2Q9Y608 721 aaKnown RBP14.5□□□□□ -0.09
RAPGEF3-213ENST00000494764 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
RAPGEF3-213ENST00000494764 SEMA3EO15041 775 aa14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 GNRH1P01148 92 aa14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 SLC4A8Q2Y0W8 1093 aa14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 ZGPATQ8N5A5 531 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 ZNF333Q96JL9 665 aa14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 ZNF112Q9UJU3 913 aa14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 PA2G4Q9UQ80 394 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-213ENST00000494764 RPAP1Q9BWH6 1393 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 SALL1Q9NSC2 1324 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 BRCA2P51587 3418 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 ECM2O94769 699 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 PHKA1P46020 1223 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 PRMT2P55345 433 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 TIMM10P62072 90 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 LACTBP83111 547 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 NFIAQ12857 509 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 ANKRD23Q86SG2 305 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 COPRSQ9NQ92 184 aa14.48□□□□□ -0.09
RAPGEF3-213ENST00000494764 RBBP6Q7Z6E9 1792 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 MYH2Q9UKX2 1941 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 PDHXO00330 501 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 MYCP01106 439 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 HOXD10P28358 340 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 CCDC102BQ68D86 513 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 C17orf99Q6UX52 265 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 ARHGAP39Q9C0H5 1083 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 FAM198AQ9UFP1 575 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 ABCF2Q9UG63 623 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 CPA4Q9UI42 421 aa14.47□□□□□ -0.09
RAPGEF3-213ENST00000494764 FMNL1O95466 1100 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 ADORA1P30542 326 aa14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 PSMC4P43686 418 aa14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 SPTY2D1Q68D10 685 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 ZSCAN29Q8IWY8 852 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 ZFPM1Q8IX07 1006 aa14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 SH3TC2Q8TF17 1288 aa14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 KCNH4Q9UQ05 1017 aa14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 AKAP2Q9Y2D5 859 aa14.46□□□□□ -0.09
RAPGEF3-213ENST00000494764 CXCL11O14625 94 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 ENTPD3O75355 529 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 GNAI3P08754 354 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 RGS3P49796 1198 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 NOL9Q5SY16 702 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 DZIP1Q86YF9 867 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 NEUROD6Q96NK8 337 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 MEIS3Q99687 375 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 IDI2Q9BXS1 227 aa14.45□□□□□ -0.1
RAPGEF3-213ENST00000494764 ZBTB22O15209 634 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 SRGAP3O43295 1099 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 ARHGAP45Q92619 1136 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 XAGE2Q96GT9 111 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 SRRDQ9UH36 339 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 ZHX2Q9Y6X8 837 aa14.44□□□□□ -0.1
RAPGEF3-213ENST00000494764 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 TFCP2Q12800 502 aa14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 GORABQ5T7V8 394 aa14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 FASTKD5Q7L8L6 764 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 RAET1EQ8TD07 263 aa14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 FAM163AQ96GL9 167 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-213ENST00000494764 ZSWIM8A7E2V4 1837 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms