RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TBC1D8O95759 1140 aa14.17□□□□□ -0.14
CTSA-209ENST00000493522 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
CTSA-209ENST00000493522 TM4SF4P48230 202 aa14.17□□□□□ -0.14
CTSA-209ENST00000493522 ARMC9Q7Z3E5 817 aa14.17□□□□□ -0.14
CTSA-209ENST00000493522 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
CTSA-209ENST00000493522 GCC1Q96CN9 775 aa14.17□□□□□ -0.14
CTSA-209ENST00000493522 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
CTSA-209ENST00000493522 TTF2Q9UNY4 1162 aaKnown RBP14.17□□□□□ -0.14
CTSA-209ENST00000493522 MCAMP43121 646 aa14.16□□□□□ -0.14
CTSA-209ENST00000493522 NOM1Q5C9Z4 860 aaKnown RBP14.16□□□□□ -0.14
CTSA-209ENST00000493522 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
CTSA-209ENST00000493522 SPATA5Q8NB90 893 aa14.16□□□□□ -0.14
CTSA-209ENST00000493522 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
CTSA-209ENST00000493522 MAST3O60307 1309 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 GPR25O00155 361 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
CTSA-209ENST00000493522 GRIK5Q16478 980 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 PRPF38BQ5VTL8 546 aaKnown RBP14.15□□□□□ -0.14
CTSA-209ENST00000493522 ZGPATQ8N5A5 531 aaKnown RBP14.15□□□□□ -0.14
CTSA-209ENST00000493522 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 ABCF2Q9UG63 623 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 HTTP42858 3142 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 CENPFP49454 3210 aa14.15□□□□□ -0.14
CTSA-209ENST00000493522 SALL1Q9NSC2 1324 aa14.15□□□□□ -0.15
CTSA-209ENST00000493522 ZBTB22O15209 634 aa14.14□□□□□ -0.15
CTSA-209ENST00000493522 IGHDP01880 384 aa14.14□□□□□ -0.15
CTSA-209ENST00000493522 LDHBP07195 334 aaKnown RBP14.14□□□□□ -0.15
CTSA-209ENST00000493522 RBM5P52756 815 aaKnown RBP eCLIP14.14□□□□□ -0.15
CTSA-209ENST00000493522 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
CTSA-209ENST00000493522 CFHR5Q9BXR6 569 aa14.14□□□□□ -0.15
CTSA-209ENST00000493522 MKI67P46013 3256 aaKnown RBP14.14□□□□□ -0.15
CTSA-209ENST00000493522 ALDH1A1P00352 501 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 PRDX5P30044 214 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 PRKG1Q13976 671 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 DLGAP5Q15398 846 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 CFAP100Q494V2 611 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 B4GALNT3Q6L9W6 998 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 FBXO46Q6PJ61 603 aaPredicted RBP14.13□□□□□ -0.15
CTSA-209ENST00000493522 DZIP1Q86YF9 867 aaKnown RBP14.13□□□□□ -0.15
CTSA-209ENST00000493522 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 GPATCH3Q96I76 525 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 ZNF512BQ96KM6 892 aaPredicted RBP14.13□□□□□ -0.15
CTSA-209ENST00000493522 SUGT1Q9Y2Z0 365 aa14.13□□□□□ -0.15
CTSA-209ENST00000493522 FKTNO75072 461 aa14.12□□□□□ -0.15
CTSA-209ENST00000493522 ZAP70P43403 619 aa14.12□□□□□ -0.15
CTSA-209ENST00000493522 CRKP46108 304 aa14.12□□□□□ -0.15
CTSA-209ENST00000493522 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
CTSA-209ENST00000493522 TEKT1Q969V4 418 aa14.12□□□□□ -0.15
CTSA-209ENST00000493522 ZBED3Q96IU2 234 aaPredicted RBP14.12□□□□□ -0.15
CTSA-209ENST00000493522 DNAJC2Q99543 621 aaKnown RBP14.12□□□□□ -0.15
CTSA-209ENST00000493522 ANGEL1Q9UNK9 670 aaKnown RBP14.12□□□□□ -0.15
CTSA-209ENST00000493522 PCDHAC2Q9Y5I4 1007 aa14.12□□□□□ -0.15
CTSA-209ENST00000493522 BRCA2P51587 3418 aa14.12□□□□□ -0.15
CTSA-209ENST00000493522 LDLRAD1Q5T700 205 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 SPRYD7Q5W111 196 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 ERICH6Q7L0X2 663 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 NAV1Q8NEY1 1877 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 LNPKQ9C0E8 428 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 DEFB129Q9H1M3 183 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 RAI14Q9P0K7 980 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 SERPINA10Q9UK55 444 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 PPP2R3BQ9Y5P8 575 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 NDUFB9Q9Y6M9 179 aa14.11□□□□□ -0.15
CTSA-209ENST00000493522 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 MANSC4A6NHS7 340 aaPredicted RBP14.1□□□□□ -0.15
CTSA-209ENST00000493522 MYO1BO43795 1136 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
CTSA-209ENST00000493522 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 INHBEP58166 350 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 HDLBPQ00341 1268 aaKnown RBP14.1□□□□□ -0.15
CTSA-209ENST00000493522 DIXDC1Q155Q3 683 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 MTMR14Q8NCE2 650 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 OTUD7AQ8TE49 926 aaPredicted RBP14.1□□□□□ -0.15
CTSA-209ENST00000493522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.1□□□□□ -0.15
CTSA-209ENST00000493522 ECHDC1Q9NTX5 307 aa14.1□□□□□ -0.15
CTSA-209ENST00000493522 MYH1P12882 1939 aa14.09□□□□□ -0.15
CTSA-209ENST00000493522 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
CTSA-209ENST00000493522 ZBTB48P10074 688 aaPredicted RBP14.09□□□□□ -0.15
CTSA-209ENST00000493522 ATP5JP18859 108 aa14.09□□□□□ -0.15
CTSA-209ENST00000493522 MX1P20591 662 aa14.09□□□□□ -0.15
CTSA-209ENST00000493522 MAP3K11Q16584 847 aa14.09□□□□□ -0.15
CTSA-209ENST00000493522 SLC10A4Q96EP9 437 aa14.09□□□□□ -0.15
CTSA-209ENST00000493522 BOLA2Q9H3K6 86 aa14.09□□□□□ -0.15
CTSA-209ENST00000493522 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
CTSA-209ENST00000493522 CLRN2A0PK11 232 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 UNCXA6NJT0 531 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 GOLIM4O00461 696 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 IDH1O75874 414 aaKnown RBP14.08□□□□□ -0.16
CTSA-209ENST00000493522 MECOMQ03112 1051 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 SUPT20HL1Q3ZLR7 823 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 CHD1LQ86WJ1 897 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 PRMT6Q96LA8 375 aaPredicted RBP14.08□□□□□ -0.16
CTSA-209ENST00000493522 VEZTQ9HBM0 779 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 DAGLAQ9Y4D2 1042 aa14.08□□□□□ -0.16
CTSA-209ENST00000493522 OTOFQ9HC10 1997 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms