RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 KIF23Q02241 960 aaPredicted RBP22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 CDC42EP5Q6NZY7 148 aa22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 RHPN1Q8TCX5 695 aa22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 HOOK2Q96ED9 719 aa22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 KIF1BPQ96EK5 621 aa22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 ZIC5Q96T25 663 aa22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 CCDC8Q9H0W5 538 aaPredicted RBP22.08■■□□□ 1.13
GTF3C2-212ENST00000493511 GAKO14976 1311 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 RAB11FIP3O75154 756 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 RRP1P56182 461 aaKnown RBP22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 GSTO1P78417 241 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 MECOMQ03112 1051 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 AACSQ86V21 672 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 USP40Q9NVE5 1235 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 LRP2BPQ9P2M1 347 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 FZD1Q9UP38 647 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 MYH2Q9UKX2 1941 aa22.07■■□□□ 1.12
GTF3C2-212ENST00000493511 TBC1D9Q6ZT07 1266 aa22.06■■□□□ 1.12
GTF3C2-212ENST00000493511 CLASRPQ8N2M8 674 aaKnown RBP22.06■■□□□ 1.12
GTF3C2-212ENST00000493511 PRDM10Q9NQV6 1147 aa22.06■■□□□ 1.12
GTF3C2-212ENST00000493511 TLR7Q9NYK1 1049 aaKnown RBP22.06■■□□□ 1.12
GTF3C2-212ENST00000493511 RAI14Q9P0K7 980 aa22.06■■□□□ 1.12
GTF3C2-212ENST00000493511 RPAP1Q9BWH6 1393 aaPredicted RBP22.06■■□□□ 1.12
GTF3C2-212ENST00000493511 USP2O75604 605 aaPredicted RBP22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 LDHCP07864 332 aa22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 FAM151AQ8WW52 585 aa22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 SLC10A4Q96EP9 437 aa22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 IL1RAPL2Q9NP60 686 aa22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 SNRKQ9NRH2 765 aa22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 MROH7-TTC4A0A0A0MT08 1334 aa22.05■■□□□ 1.12
GTF3C2-212ENST00000493511 APBB1O00213 710 aa22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 IGSF3O75054 1194 aa22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 HSPA8P11142 646 aaKnown RBP22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 LBX1P52954 281 aa22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 COL13A1Q5TAT6 717 aaPredicted RBP22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 CDAN1Q8IWY9 1227 aa22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 ANKRD13AQ8IZ07 590 aa22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 NSUN4Q96CB9 384 aaKnown RBP22.04■■□□□ 1.12
GTF3C2-212ENST00000493511 BTDP43251 543 aa22.03■■□□□ 1.12
GTF3C2-212ENST00000493511 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
GTF3C2-212ENST00000493511 AKAP11Q9UKA4 1901 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 GPR75-ASB3A0A0A6YYF3 556 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 TCP10Q12799 353 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 NFIAQ12857 509 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 DCAF15Q66K64 600 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 IDI2Q9BXS1 227 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 SAGE1Q9NXZ1 904 aa22.02■■□□□ 1.12
GTF3C2-212ENST00000493511 MAP4K4O95819 1239 aaPredicted RBP22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 CYP2E1P05181 493 aaPredicted RBP22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 IFIT2P09913 472 aaKnown RBP22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 ZBTB48P10074 688 aaPredicted RBP22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 SREBF2Q12772 1141 aa22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 SPRYD7Q5W111 196 aa22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 ZNF384Q8TF68 577 aa22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 CLMNQ96JQ2 1002 aa22.01■■□□□ 1.11
GTF3C2-212ENST00000493511 ENTPD3O75355 529 aa22■■□□□ 1.11
GTF3C2-212ENST00000493511 ZAP70P43403 619 aa22■■□□□ 1.11
GTF3C2-212ENST00000493511 MKRN3Q13064 507 aaKnown RBP22■■□□□ 1.11
GTF3C2-212ENST00000493511 NAA16Q6N069 864 aaPredicted RBP22■■□□□ 1.11
GTF3C2-212ENST00000493511 NOL10Q9BSC4 688 aaKnown RBP22■■□□□ 1.11
GTF3C2-212ENST00000493511 ZBTB4Q9P1Z0 1013 aaPredicted RBP22■■□□□ 1.11
GTF3C2-212ENST00000493511 FAM198AQ9UFP1 575 aa22■■□□□ 1.11
GTF3C2-212ENST00000493511 RGS3P49796 1198 aa21.99■■□□□ 1.11
GTF3C2-212ENST00000493511 MAP3K9P80192 1104 aa21.99■■□□□ 1.11
GTF3C2-212ENST00000493511 TSKSQ9UJT2 592 aa21.99■■□□□ 1.11
GTF3C2-212ENST00000493511 CSADQ9Y600 493 aa21.99■■□□□ 1.11
GTF3C2-212ENST00000493511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.98■■□□□ 1.11
GTF3C2-212ENST00000493511 WNK4Q96J92 1243 aa21.98■■□□□ 1.11
GTF3C2-212ENST00000493511 LRRCC1Q9C099 1032 aa21.98■■□□□ 1.11
GTF3C2-212ENST00000493511 RNF186Q9NXI6 227 aa21.98■■□□□ 1.11
GTF3C2-212ENST00000493511 RFX7Q2KHR2 1363 aa21.98■■□□□ 1.11
GTF3C2-212ENST00000493511 AK9Q5TCS8 1911 aa21.98■■□□□ 1.11
GTF3C2-212ENST00000493511 MANSC4A6NHS7 340 aaPredicted RBP21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 WDHD1O75717 1129 aaPredicted RBP21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 TRPA1O75762 1119 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 BAG3O95817 575 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 TM4SF4P48230 202 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 INHBEP58166 350 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 VGLL4Q14135 290 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 WRNIP1Q96S55 665 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 ZNF341Q9BYN7 854 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 BCL11AQ9H165 835 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 MAST2Q6P0Q8 1798 aa21.97■■□□□ 1.11
GTF3C2-212ENST00000493511 OTOFQ9HC10 1997 aa21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 NPM3O75607 178 aaKnown RBP21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 PLCG2P16885 1265 aa21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 RHBDL3P58872 404 aa21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 TMED8Q6PL24 325 aaPredicted RBP21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 MIGA2Q7L4E1 593 aa21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 TNS4Q8IZW8 715 aa21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 ELP3Q9H9T3 547 aa21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 PIH1D3Q9NQM4 214 aaKnown RBP21.96■■□□□ 1.11
GTF3C2-212ENST00000493511 IDH1O75874 414 aaKnown RBP21.95■■□□□ 1.1
GTF3C2-212ENST00000493511 PICALMQ13492 652 aa21.95■■□□□ 1.1
GTF3C2-212ENST00000493511 TTF1Q15361 905 aaPredicted RBP21.95■■□□□ 1.1
GTF3C2-212ENST00000493511 ZSCAN29Q8IWY8 852 aaPredicted RBP21.95■■□□□ 1.1
GTF3C2-212ENST00000493511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.95■■□□□ 1.1
GTF3C2-212ENST00000493511 DCTPP1Q9H773 170 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms