RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 FAM102BQ5T8I3 360 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 RNF219Q5W0B1 726 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 FBXW10Q5XX13 1052 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 ICE2Q659A1 982 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 PRPF40BQ6NWY9 871 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 NBPF10Q6P3W6 841 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 FBXL19Q6PCT2 694 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 PI16Q6UXB8 463 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 DDX46Q7L014 1031 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 CNPY4Q8N129 248 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 GOLM1Q8NBJ4 401 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 RHOVQ96L33 236 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 IPO9Q96P70 1041 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 CEP44Q9C0F1 390 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 CDH19Q9H159 772 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 PPCSQ9HAB8 311 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 ENAMQ9NRM1 1142 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 AASDHPPTQ9NRN7 309 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 FBXO2Q9UK22 296 aaPredicted RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 ADAMTS8Q9UP79 889 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 MRPS23Q9Y3D9 190 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 PTMAP06454 111 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 CASP7P55210 303 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 CWF19L2Q2TBE0 894 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 CXorf57Q6NSI4 855 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 EEPD1Q7L9B9 569 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 GALNT12Q8IXK2 581 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 LRRC47Q8N1G4 583 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 ZNF511Q8NB15 262 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 CDC5LQ99459 802 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 OSBPL3Q9H4L5 887 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 UBP1Q9NZI7 540 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 USP25Q9UHP3 1055 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 ZMYM5Q9UJ78 669 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 MAP4K5Q9Y4K4 846 aa6.37□□□□□ -1.39
R3HDM1-216ENST00000483065 DNAJC25-GNG10A0A024R161 153 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 ERVH48-1M5A8F1 160 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 RFPL1O75677 317 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 PHKG2P15735 406 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 GTF2E1P29083 439 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 MCM4P33991 863 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 IRS1P35568 1242 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 DDIT3P35638 169 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 SCTRP47872 440 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 KCTD2Q14681 263 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 PPP2R5EQ16537 467 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 TBCELQ5QJ74 424 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 FAM196AQ6ZSG2 479 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 CCDC84Q86UT8 332 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 ZNF354CQ86Y25 554 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 PPM1KQ8N3J5 372 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 C19orf47Q8N9M1 422 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 C1orf131Q8NDD1 294 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 PHC3Q8NDX5 983 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 KIF2CQ99661 725 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 HERPUD2Q9BSE4 406 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 LRRC3Q9BY71 257 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 EPN3Q9H201 632 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 INTS7Q9NVH2 962 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 SLC5A4Q9NY91 659 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 PPP2R3BQ9Y5P8 575 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
R3HDM1-216ENST00000483065 A0A087X0B3 334 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 EML1O00423 815 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 IRS4O14654 1257 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 BRINP1O60477 761 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 TCEA3O75764 348 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 TRIM27P14373 513 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 POU3F3P20264 500 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 HTR3AP46098 478 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 FAM160A1Q05DH4 1040 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 PABPC4Q13310 644 aaKnown RBP eCLIP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 CAMK2GQ13555 558 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 MAP7Q14244 749 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 SLC9A5Q14940 896 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 LRRC41Q15345 812 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 FNDC3BQ53EP0 1204 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 ANO1Q5XXA6 986 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 CCDC81Q6ZN84 652 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 SPICE1Q8N0Z3 855 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 REXO1Q8N1G1 1221 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 MAGEB6Q8N7X4 407 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 CCDC89Q8N998 374 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 BAP1Q92560 729 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 SCLT1Q96NL6 688 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 ASPSCR1Q9BZE9 553 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 PUS7LQ9H0K6 701 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 NRBP1Q9UHY1 535 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 ZNF180Q9UJW8 692 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 TPX2Q9ULW0 747 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 PPT2Q9UMR5 302 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 PARP3Q9Y6F1 533 aa6.35□□□□□ -1.39
R3HDM1-216ENST00000483065 GJB6O95452 261 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms