RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 RAI14Q9P0K7 980 aa8.07□□□□□ -1.12
ECHDC1-210ENST00000454859 GSG1L2A8MUP6 293 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 MBD4O95243 580 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 GPSM2P81274 684 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 HDLBPQ00341 1268 aaKnown RBP8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 TOB2Q14106 344 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 AKNAD1Q5T1N1 836 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 SGMS1Q86VZ5 419 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 MPNDQ8N594 471 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 TNPO1Q92973 898 aaKnown RBP8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 GTF3C6Q969F1 213 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 CD209Q9NNX6 404 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 ARPP21Q9UBL0 812 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 NDUFB9Q9Y6M9 179 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 CDKL5O76039 1030 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 UFL1O94874 794 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 FGD1P98174 961 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 CPLX2Q6PUV4 134 aaKnown RBP8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 PI16Q6UXB8 463 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 PODNQ7Z5L7 613 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 FAM177A1Q8N128 213 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 PLSCR2Q9NRY7 297 aa8.06□□□□□ -1.12
ECHDC1-210ENST00000454859 NAV1Q8NEY1 1877 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 ROBO3Q96MS0 1386 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 CDK5RAP2Q96SN8 1893 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 ORC4O43929 436 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 MFSD6Q6ZSS7 791 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 Q6ZUG5 572 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 SMARCC2Q8TAQ2 1214 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 ZC3H12CQ9C0D7 883 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 FOXD4L1Q9NU39 408 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 TPCN1Q9ULQ1 816 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 SLC4A4Q9Y6R1 1079 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 GAKO14976 1311 aa8.05□□□□□ -1.12
ECHDC1-210ENST00000454859 CCDC196A0A1B0GTZ2 297 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 SOCS7O14512 581 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 APPP05067 770 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 MECOMQ03112 1051 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ME3Q16798 604 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ABCF2Q9UG63 623 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ANGEL1Q9UNK9 670 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 DDX60LQ5H9U9 1706 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ECM29Q5VYK3 1845 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 GPR75-ASB3A0A0A6YYF3 556 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 STX6O43752 255 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 TDO2P48775 406 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 TGFB2P61812 414 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 EZH2Q15910 746 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 DPP8Q6V1X1 898 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 RTKN2Q8IZC4 609 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ESR2Q92731 530 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 MAP3K14Q99558 947 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ZSCAN16Q9H4T2 348 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 MYH15Q9Y2K3 1946 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 MROH7-TTC4A0A0A0MT08 1334 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 MYO3BQ8WXR4 1341 aa8.04□□□□□ -1.12
ECHDC1-210ENST00000454859 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 ERICH2A1L162 156 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 PRC1O43663 620 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 MBD3O95983 291 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 CALM1P0DP23 149 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 CALM2P0DP24 149 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 CALM3P0DP25 149 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 ZSCAN22P10073 491 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 SMIM5Q71RC9 77 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 STK36Q9NRP7 1315 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 COL2A1P02458 1487 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 EN1Q05925 392 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 PDE4BQ07343 736 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 PPARAQ07869 468 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 HHIPL2Q6UWX4 724 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 LCORLQ8N3X6 602 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 WASF1Q92558 559 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 PSMD1Q99460 953 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 ARMT1Q9H993 441 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
ECHDC1-210ENST00000454859 MYH1P12882 1939 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 BAZ2AQ9UIF9 1905 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 SH2B2O14492 632 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 PDIA3P30101 505 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 C7orf43Q8WVR3 580 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 ANKS1AQ92625 1134 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 BRF1Q92994 677 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 EPB41L4AQ9HCS5 686 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 TCP11L1Q9NUJ3 509 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 POLLQ9UGP5 575 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 BRCA1P38398 1863 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 SNAP23O00161 211 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 SYT1P21579 422 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms