RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 RTL9Q8NET4 1388 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 TAF1LQ8IZX4 1826 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 GLRX3O76003 335 aaKnown RBP9.34□□□□□ -0.91
HMGB2-202ENST00000438704 SDSP20132 328 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 FSHRP23945 695 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
HMGB2-202ENST00000438704 PTF1AQ7RTS3 328 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
HMGB2-202ENST00000438704 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 SCN7AQ01118 1682 aa9.34□□□□□ -0.91
HMGB2-202ENST00000438704 UBN2Q6ZU65 1347 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 EYA2O00167 538 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 ERC2O15083 957 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 MAN1A2O60476 641 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 IL15P40933 162 aaPredicted RBP9.33□□□□□ -0.92
HMGB2-202ENST00000438704 OS9Q13438 667 aaPredicted RBP9.33□□□□□ -0.92
HMGB2-202ENST00000438704 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 IL1RAPL2Q9NP60 686 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 ECHDC1Q9NTX5 307 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 NARFQ9UHQ1 456 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 CCNL1Q9UK58 526 aaPredicted RBP9.33□□□□□ -0.92
HMGB2-202ENST00000438704 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 LRP5O75197 1615 aa9.33□□□□□ -0.92
HMGB2-202ENST00000438704 SH3TC1Q8TE82 1336 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 APBB1O00213 710 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 PDE8AO60658 829 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 CTSWP56202 376 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
HMGB2-202ENST00000438704 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 VASH1Q7L8A9 365 aaPredicted RBP9.32□□□□□ -0.92
HMGB2-202ENST00000438704 ATG9AQ7Z3C6 839 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 TTLL11Q8NHH1 800 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 EAF2Q96CJ1 260 aaPredicted RBP9.32□□□□□ -0.92
HMGB2-202ENST00000438704 IL17RAQ96F46 866 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 UTP14AQ9BVJ6 771 aaKnown RBP9.32□□□□□ -0.92
HMGB2-202ENST00000438704 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
HMGB2-202ENST00000438704 BRWD3Q6RI45 1802 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 MYH3P11055 1940 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 LAMB2P55268 1798 aa9.32□□□□□ -0.92
HMGB2-202ENST00000438704 C4BP0C0L5 1744 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 IRS4O14654 1257 aaPredicted RBP9.31□□□□□ -0.92
HMGB2-202ENST00000438704 NTSR2O95665 410 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 IFIT2P09913 472 aaKnown RBP9.31□□□□□ -0.92
HMGB2-202ENST00000438704 BMP2P12643 396 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 TNNI3KQ59H18 835 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 SLC10A5Q5PT55 438 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 FBXO41Q8TF61 875 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 FAM89AQ96GI7 184 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 TRMT112Q9UI30 125 aaKnown RBP9.31□□□□□ -0.92
HMGB2-202ENST00000438704 FPGT-TNNI3KV9GXZ4 949 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 RFX7Q2KHR2 1363 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 COL24A1Q17RW2 1714 aa9.31□□□□□ -0.92
HMGB2-202ENST00000438704 ABCC12Q96J65 1359 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 PLSCR1O15162 318 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 REC8O95072 547 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 ATP5JP18859 108 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 GPTP24298 496 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 IFIT5Q13325 482 aaKnown RBP9.3□□□□□ -0.92
HMGB2-202ENST00000438704 CCDC57Q2TAC2 916 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 SUSD4Q5VX71 490 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 AACSQ86V21 672 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 CCDC116Q8IYX3 515 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.924e-39■□□□□ 10.3
HMGB2-202ENST00000438704 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
HMGB2-202ENST00000438704 TSEN34Q9BSV6 310 aaKnown RBP9.3□□□□□ -0.92
HMGB2-202ENST00000438704 C22orf23Q9BZE7 217 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 RTCBQ9Y3I0 505 aaKnown RBP9.3□□□□□ -0.92
HMGB2-202ENST00000438704 RIC1Q4ADV7 1423 aa9.3□□□□□ -0.92
HMGB2-202ENST00000438704 RGPD3A6NKT7 1758 aaPredicted RBP9.29□□□□□ -0.92
HMGB2-202ENST00000438704 RGPD4Q7Z3J3 1758 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 MAGEB6P1A0A0J9YX57 407 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 CHMLP26374 656 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 TFCP2Q12800 502 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 SF3B3Q15393 1217 aaKnown RBP9.29□□□□□ -0.92
HMGB2-202ENST00000438704 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 KLHDC4Q8TBB5 520 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 EVI5LQ96CN4 794 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 NIP7Q9Y221 180 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGB2-202ENST00000438704 RIPOR2Q9Y4F9 1068 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
HMGB2-202ENST00000438704 ZNF609O15014 1411 aa9.29□□□□□ -0.92
HMGB2-202ENST00000438704 ANKRD18BA2A2Z9 1011 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 HIP1O00291 1037 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 ITGA6P23229 1130 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 SSFA2P28290 1259 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 RXRBP28702 533 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 MFAP1P55081 439 aaKnown RBP9.28□□□□□ -0.92
HMGB2-202ENST00000438704 FAM182BQ5T319 152 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 ZNF512BQ96KM6 892 aaPredicted RBP9.28□□□□□ -0.92
HMGB2-202ENST00000438704 ESYT1Q9BSJ8 1104 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 USP26Q9BXU7 913 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 NYXQ9GZU5 481 aa9.28□□□□□ -0.92
HMGB2-202ENST00000438704 SIL1Q9H173 461 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms