RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 CWF19L2Q2TBE0 894 aaKnown RBP10.86□□□□□ -0.67
HDAC1-202ENST00000428704 CENPQQ7L2Z9 268 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-202ENST00000428704 PODNQ7Z5L7 613 aa10.86□□□□□ -0.67
HDAC1-202ENST00000428704 JARID2Q92833 1246 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-202ENST00000428704 DEFB129Q9H1M3 183 aa10.86□□□□□ -0.67
HDAC1-202ENST00000428704 CWC25Q9NXE8 425 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-202ENST00000428704 SPTBN5Q9NRC6 3674 aaKnown RBP10.85□□□□□ -0.67
HDAC1-202ENST00000428704 SCN9AQ15858 1988 aa10.85□□□□□ -0.67
HDAC1-202ENST00000428704 NEURL1BA8MQ27 555 aa10.85□□□□□ -0.67
HDAC1-202ENST00000428704 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-202ENST00000428704 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
HDAC1-202ENST00000428704 MXD3Q9BW11 206 aa10.85□□□□□ -0.67
HDAC1-202ENST00000428704 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
HDAC1-202ENST00000428704 COL1A1P02452 1464 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-202ENST00000428704 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 MYO3BQ8WXR4 1341 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 ZNF646O15015 1829 aaPredicted RBP10.84□□□□□ -0.67
HDAC1-202ENST00000428704 GNRH1P01148 92 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 CCL5P13501 91 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 IREB2P48200 963 aaKnown RBP10.84□□□□□ -0.67
HDAC1-202ENST00000428704 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
HDAC1-202ENST00000428704 FKBP5Q13451 457 aaPredicted RBP10.84□□□□□ -0.67
HDAC1-202ENST00000428704 LRIT3Q3SXY7 679 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 PLPP6Q8IY26 295 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 RNF208Q9H0X6 261 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
HDAC1-202ENST00000428704 PSME4Q14997 1843 aa10.84□□□□□ -0.67
HDAC1-202ENST00000428704 CCL15-CCL14A0A0B4J2E2 113 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 PDE8AO60658 829 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 GRK4P32298 578 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 BMP8BP34820 402 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 BCAMP50895 628 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 CASP7P55210 303 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 CCL15Q16663 113 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 DACT2Q5SW24 774 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 RAET1EQ8TD07 263 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 DNAAF4Q8WXU2 420 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 OPTNQ96CV9 577 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 GDF15Q99988 308 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 PPP2R3BQ9Y5P8 575 aa10.83□□□□□ -0.68
HDAC1-202ENST00000428704 SSC5DA1L4H1 1573 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 F6X3S4 739 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 H7C1W4 665 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 MMP14P50281 582 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 CTSWP56202 376 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 UBXN2AP68543 259 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 NEXNQ0ZGT2 675 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 GCKRQ14397 625 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 ALDH1L2Q3SY69 923 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 U2AF1L4Q8WU68 220 aaKnown RBP10.82□□□□□ -0.68
HDAC1-202ENST00000428704 ELP3Q9H9T3 547 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 XDHP47989 1333 aa10.82□□□□□ -0.68
HDAC1-202ENST00000428704 TLR2O60603 784 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 ATP2B4P23634 1241 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 HOXD10P28358 340 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 STRIP1Q5VSL9 837 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 KIAA0825Q8IV33 1275 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 TDHQ8IZJ6 230 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 FAM43AQ8N2R8 423 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 TTLL11Q8NHH1 800 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 CCDC85AQ96PX6 553 aaPredicted RBP10.81□□□□□ -0.68
HDAC1-202ENST00000428704 SRRDQ9UH36 339 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 IRS2Q9Y4H2 1338 aa10.81□□□□□ -0.68
HDAC1-202ENST00000428704 SNPHO15079 494 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 USP2O75604 605 aaPredicted RBP10.8□□□□□ -0.68
HDAC1-202ENST00000428704 PLA2G5P39877 138 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 GTF2A2P52657 109 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 DLGAP5Q15398 846 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 CCDC152Q4G0S7 254 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 BEND3Q5T5X7 828 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 ZKSCAN2Q63HK3 967 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 CLUAP1Q96AJ1 413 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 FAM122AQ96E09 287 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 PLA2G12BQ9BX93 195 aa10.8□□□□□ -0.68
HDAC1-202ENST00000428704 ZMYND8Q9ULU4 1186 aaPredicted RBP10.8□□□□□ -0.68
HDAC1-202ENST00000428704 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
HDAC1-202ENST00000428704 SGPL1O95470 568 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 TFRCP02786 760 aaKnown RBP10.79□□□□□ -0.68
HDAC1-202ENST00000428704 HSP90B1P14625 803 aaKnown RBP10.79□□□□□ -0.68
HDAC1-202ENST00000428704 PSMC4P43686 418 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 NBPF12Q5TAG4 269 aaPredicted RBP10.79□□□□□ -0.68
HDAC1-202ENST00000428704 C7orf61Q8IZ16 206 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 MRPL50Q8N5N7 158 aaKnown RBP10.79□□□□□ -0.68
HDAC1-202ENST00000428704 SSH1Q8WYL5 1049 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 ZBED3Q96IU2 234 aaPredicted RBP10.79□□□□□ -0.68
HDAC1-202ENST00000428704 GREM2Q9H772 168 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 RAPGEFL1Q9UHV5 662 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 ZNF804BA4D1E1 1349 aa10.79□□□□□ -0.68
HDAC1-202ENST00000428704 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
HDAC1-202ENST00000428704 MYO1BO43795 1136 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 HOXB3P14651 431 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms