RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 MCAMP43121 646 aa17.84■□□□□ 0.45
NCKIPSD-205ENST00000426678 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
NCKIPSD-205ENST00000426678 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-205ENST00000426678 TEPSINQ96N21 525 aa17.84■□□□□ 0.45
NCKIPSD-205ENST00000426678 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-205ENST00000426678 AKAP11Q9UKA4 1901 aa17.84■□□□□ 0.45
NCKIPSD-205ENST00000426678 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.45
NCKIPSD-205ENST00000426678 GAKO14976 1311 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 UNCXA6NJT0 531 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 EAF2Q96CJ1 260 aaPredicted RBP17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 HOOK2Q96ED9 719 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 USP40Q9NVE5 1235 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 RAI14Q9P0K7 980 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 TSKSQ9UJT2 592 aa17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.44
NCKIPSD-205ENST00000426678 OTOFQ9HC10 1997 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 MROH7-TTC4A0A0A0MT08 1334 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 USP2O75604 605 aaPredicted RBP17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 MECOMQ03112 1051 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 MKRN3Q13064 507 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 AACSQ86V21 672 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 ANKRD13AQ8IZ07 590 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 TNS4Q8IZW8 715 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 SLC10A4Q96EP9 437 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 SNRKQ9NRH2 765 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 TLR7Q9NYK1 1049 aaKnown RBP17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 LRP2BPQ9P2M1 347 aa17.82■□□□□ 0.44
NCKIPSD-205ENST00000426678 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 APBB1O00213 710 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 LDHCP07864 332 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 GSTO1P78417 241 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 TCP10Q12799 353 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 SIRT2Q8IXJ6 389 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 CLMNQ96JQ2 1002 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 ZNF512BQ96KM6 892 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 CSRNP1Q96S65 589 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
NCKIPSD-205ENST00000426678 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 BTDP43251 543 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 SREBF2Q12772 1141 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 SPRYD7Q5W111 196 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 DCAF15Q66K64 600 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 CLASRPQ8N2M8 674 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 FAM151AQ8WW52 585 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 FAM163AQ96GL9 167 aaPredicted RBP17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
NCKIPSD-205ENST00000426678 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
NCKIPSD-205ENST00000426678 NFIAQ12857 509 aa17.79■□□□□ 0.44
NCKIPSD-205ENST00000426678 NSUN4Q96CB9 384 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-205ENST00000426678 WNK4Q96J92 1243 aa17.79■□□□□ 0.44
NCKIPSD-205ENST00000426678 TRPA1O75762 1119 aa17.78■□□□□ 0.44
NCKIPSD-205ENST00000426678 ZBTB48P10074 688 aaPredicted RBP17.78■□□□□ 0.44
NCKIPSD-205ENST00000426678 ZAP70P43403 619 aa17.78■□□□□ 0.44
NCKIPSD-205ENST00000426678 NOL10Q9BSC4 688 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-205ENST00000426678 RNF186Q9NXI6 227 aa17.78■□□□□ 0.44
NCKIPSD-205ENST00000426678 CSADQ9Y600 493 aa17.78■□□□□ 0.44
NCKIPSD-205ENST00000426678 GPR75-ASB3A0A0A6YYF3 556 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 CYP2E1P05181 493 aaPredicted RBP17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 RGS3P49796 1198 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 MAP3K9P80192 1104 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 IDI2Q9BXS1 227 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 BCL11AQ9H165 835 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 ELP3Q9H9T3 547 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 FAM198AQ9UFP1 575 aa17.77■□□□□ 0.44
NCKIPSD-205ENST00000426678 RFX7Q2KHR2 1363 aa17.77■□□□□ 0.43
NCKIPSD-205ENST00000426678 DOCK2Q92608 1830 aa17.77■□□□□ 0.43
NCKIPSD-205ENST00000426678 MANSC4A6NHS7 340 aaPredicted RBP17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 IGSF3O75054 1194 aa17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 ENTPD3O75355 529 aa17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 VGLL4Q14135 290 aa17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 WRNIP1Q96S55 665 aa17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 ZNF341Q9BYN7 854 aa17.76■□□□□ 0.43
NCKIPSD-205ENST00000426678 MAP4K4O95819 1239 aaPredicted RBP17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 TM4SF4P48230 202 aa17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 PICALMQ13492 652 aa17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 ZSCAN29Q8IWY8 852 aaPredicted RBP17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 OPTNQ96CV9 577 aa17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 LAMB1P07942 1786 aa17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
NCKIPSD-205ENST00000426678 WDHD1O75717 1129 aaPredicted RBP17.74■□□□□ 0.43
NCKIPSD-205ENST00000426678 BAG3O95817 575 aa17.74■□□□□ 0.43
NCKIPSD-205ENST00000426678 INHBEP58166 350 aa17.74■□□□□ 0.43
NCKIPSD-205ENST00000426678 RHBDL3P58872 404 aa17.74■□□□□ 0.43
NCKIPSD-205ENST00000426678 PIH1D3Q9NQM4 214 aaKnown RBP17.74■□□□□ 0.43
NCKIPSD-205ENST00000426678 CASP8AP2Q9UKL3 1982 aa17.73■□□□□ 0.43
NCKIPSD-205ENST00000426678 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
NCKIPSD-205ENST00000426678 ZFPM1Q8IX07 1006 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms