RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SGPL1O95470 568 aa18.01■□□□□ 0.47
HDAC6-206ENST00000426196 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-206ENST00000426196 TSR2Q969E8 191 aaKnown RBP18.01■□□□□ 0.47
HDAC6-206ENST00000426196 ZNF594Q96JF6 807 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-206ENST00000426196 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
HDAC6-206ENST00000426196 ZNF341Q9BYN7 854 aa18.01■□□□□ 0.47
HDAC6-206ENST00000426196 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
HDAC6-206ENST00000426196 STAP2Q9UGK3 403 aa18.01■□□□□ 0.47
HDAC6-206ENST00000426196 FKBP1CQ5VVH2 108 aa18■□□□□ 0.47
HDAC6-206ENST00000426196 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
HDAC6-206ENST00000426196 VPS37DQ86XT2 251 aa18■□□□□ 0.47
HDAC6-206ENST00000426196 TBC1D22AQ8WUA7 517 aa18■□□□□ 0.47
HDAC6-206ENST00000426196 FAM84BQ96KN1 310 aaPredicted RBP18■□□□□ 0.47
HDAC6-206ENST00000426196 RPAP1Q9BWH6 1393 aaPredicted RBP18■□□□□ 0.47
HDAC6-206ENST00000426196 GPR153Q6NV75 609 aa17.99■□□□□ 0.47
HDAC6-206ENST00000426196 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-206ENST00000426196 TFRCP02786 760 aaKnown RBP17.98■□□□□ 0.47
HDAC6-206ENST00000426196 CHAF1AQ13111 956 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-206ENST00000426196 KCNH4Q9UQ05 1017 aa17.98■□□□□ 0.47
HDAC6-206ENST00000426196 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
HDAC6-206ENST00000426196 ADCY3O60266 1144 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 BCRP11274 1271 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 INPP5BP32019 993 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 GRIK5Q16478 980 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 MIGA2Q7L4E1 593 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 DEFB123Q8N688 67 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 ZDHHC15Q96MV8 337 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 MAST3O60307 1309 aa17.97■□□□□ 0.47
HDAC6-206ENST00000426196 LAMA2P24043 3122 aaKnown RBP17.96■□□□□ 0.47
HDAC6-206ENST00000426196 INHAP05111 366 aa17.96■□□□□ 0.47
HDAC6-206ENST00000426196 DEFB118Q96PH6 123 aa17.96■□□□□ 0.47
HDAC6-206ENST00000426196 GABRQQ9UN88 632 aa17.96■□□□□ 0.47
HDAC6-206ENST00000426196 IQSEC3Q9UPP2 1182 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-206ENST00000426196 BMP8BP34820 402 aa17.95■□□□□ 0.46
HDAC6-206ENST00000426196 MRIQ9BWK5 157 aa17.95■□□□□ 0.46
HDAC6-206ENST00000426196 STXBP5LQ9Y2K9 1186 aa17.95■□□□□ 0.46
HDAC6-206ENST00000426196 MYH13Q9UKX3 1938 aa17.95■□□□□ 0.46
HDAC6-206ENST00000426196 VCANP13611 3396 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 ELNP15502 786 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 FLT3LGP49771 235 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 MOGSQ13724 837 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 APOBEC3HQ6NTF7 200 aaKnown RBP17.94■□□□□ 0.46
HDAC6-206ENST00000426196 NECAB2Q7Z6G3 386 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 FBXO33Q7Z6M2 555 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 PXYLP1Q8TE99 480 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 GDF15Q99988 308 aa17.94■□□□□ 0.46
HDAC6-206ENST00000426196 GRM8O00222 908 aa17.93■□□□□ 0.46
HDAC6-206ENST00000426196 CYP2C8P10632 490 aa17.93■□□□□ 0.46
HDAC6-206ENST00000426196 NOL9Q5SY16 702 aaKnown RBP17.93■□□□□ 0.46
HDAC6-206ENST00000426196 PAWRQ96IZ0 340 aaKnown RBP17.93■□□□□ 0.46
HDAC6-206ENST00000426196 PAK6Q9NQU5 681 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-206ENST00000426196 ZNF112Q9UJU3 913 aa17.93■□□□□ 0.46
HDAC6-206ENST00000426196 SUGT1Q9Y2Z0 365 aa17.93■□□□□ 0.46
HDAC6-206ENST00000426196 MROH5Q6ZUA9 1318 aa17.93■□□□□ 0.46
HDAC6-206ENST00000426196 CXCL11O14625 94 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 TNPO2O14787 897 aaKnown RBP17.92■□□□□ 0.46
HDAC6-206ENST00000426196 IRF5Q13568 498 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 BEND3Q5T5X7 828 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 HHIPL2Q6UWX4 724 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 C7orf61Q8IZ16 206 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 FAM151AQ8WW52 585 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 CRISPLD2Q9H0B8 497 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 PTPRFP10586 1907 aa17.92■□□□□ 0.46
HDAC6-206ENST00000426196 F6X3S4 739 aa17.91■□□□□ 0.46
HDAC6-206ENST00000426196 DDX10Q13206 875 aaKnown RBP17.91■□□□□ 0.46
HDAC6-206ENST00000426196 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
HDAC6-206ENST00000426196 Q7L0L9 218 aa17.91■□□□□ 0.46
HDAC6-206ENST00000426196 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
HDAC6-206ENST00000426196 PUS3Q9BZE2 481 aaKnown RBP17.91■□□□□ 0.46
HDAC6-206ENST00000426196 C9orf78Q9NZ63 289 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-206ENST00000426196 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
HDAC6-206ENST00000426196 BCAMP50895 628 aa17.9■□□□□ 0.46
HDAC6-206ENST00000426196 LRIT3Q3SXY7 679 aa17.9■□□□□ 0.46
HDAC6-206ENST00000426196 ZMYND8Q9ULU4 1186 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-206ENST00000426196 DOCK2Q92608 1830 aa17.89■□□□□ 0.45
HDAC6-206ENST00000426196 TCP10Q12799 353 aa17.89■□□□□ 0.45
HDAC6-206ENST00000426196 ANKLE1Q8NAG6 615 aa17.89■□□□□ 0.45
HDAC6-206ENST00000426196 SMCR8Q8TEV9 937 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-206ENST00000426196 DIS3LQ8TF46 1054 aaKnown RBP17.89■□□□□ 0.45
HDAC6-206ENST00000426196 MTMR10Q9NXD2 777 aa17.89■□□□□ 0.45
HDAC6-206ENST00000426196 EYSQ5T1H1 3165 aa17.89■□□□□ 0.45
HDAC6-206ENST00000426196 A0A0G2JLL6 359 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-206ENST00000426196 METTL24Q5JXM2 366 aa17.88■□□□□ 0.45
HDAC6-206ENST00000426196 GADL1Q6ZQY3 521 aa17.88■□□□□ 0.45
HDAC6-206ENST00000426196 PRRT2Q7Z6L0 340 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-206ENST00000426196 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
HDAC6-206ENST00000426196 COA7Q96BR5 231 aa17.88■□□□□ 0.45
HDAC6-206ENST00000426196 COL25A1Q9BXS0 654 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-206ENST00000426196 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC6-206ENST00000426196 PICK1Q9NRD5 415 aa17.88■□□□□ 0.45
HDAC6-206ENST00000426196 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
HDAC6-206ENST00000426196 CCDC27Q2M243 656 aa17.87■□□□□ 0.45
HDAC6-206ENST00000426196 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
HDAC6-206ENST00000426196 IL16Q14005 1332 aa17.87■□□□□ 0.45
HDAC6-206ENST00000426196 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
HDAC6-206ENST00000426196 MAGEA10P43363 369 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-206ENST00000426196 ZHX2Q9Y6X8 837 aa17.86■□□□□ 0.45
HDAC6-206ENST00000426196 PRUNE2Q8WUY3 3088 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms