RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 G3BP1Q13283 466 aaKnown RBP eCLIP22.65■■□□□ 1.22
FXN-203ENST00000396366 CTU1Q7Z7A3 348 aaKnown RBP22.65■■□□□ 1.22
FXN-203ENST00000396366 PTPN18Q99952 460 aa22.65■■□□□ 1.22
FXN-203ENST00000396366 USP40Q9NVE5 1235 aa22.65■■□□□ 1.22
FXN-203ENST00000396366 MIGA2Q7L4E1 593 aa22.64■■□□□ 1.21
FXN-203ENST00000396366 ITPRIPQ8IWB1 547 aa22.64■■□□□ 1.21
FXN-203ENST00000396366 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.21
FXN-203ENST00000396366 ABCF2Q9UG63 623 aa22.64■■□□□ 1.21
FXN-203ENST00000396366 LAMB1P07942 1786 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 MYH2Q9UKX2 1941 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 ZBTB7BO15156 539 aaPredicted RBP22.63■■□□□ 1.21
FXN-203ENST00000396366 ATP8B2P98198 1209 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 POLA2Q14181 598 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 PI16Q6UXB8 463 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 ZFPM1Q8IX07 1006 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 ZKSCAN4Q969J2 545 aaPredicted RBP22.63■■□□□ 1.21
FXN-203ENST00000396366 CFHR5Q9BXR6 569 aa22.63■■□□□ 1.21
FXN-203ENST00000396366 ZBTB22O15209 634 aa22.62■■□□□ 1.21
FXN-203ENST00000396366 MVPQ14764 893 aaKnown RBP22.62■■□□□ 1.21
FXN-203ENST00000396366 FAM151AQ8WW52 585 aa22.62■■□□□ 1.21
FXN-203ENST00000396366 MS4A4AQ96JQ5 239 aa22.62■■□□□ 1.21
FXN-203ENST00000396366 HMG20BQ9P0W2 317 aa22.62■■□□□ 1.21
FXN-203ENST00000396366 FAM198AQ9UFP1 575 aa22.62■■□□□ 1.21
FXN-203ENST00000396366 ALDH1A1P00352 501 aa22.61■■□□□ 1.21
FXN-203ENST00000396366 TBC1D9Q6ZT07 1266 aa22.61■■□□□ 1.21
FXN-203ENST00000396366 SSH3Q8TE77 659 aa22.61■■□□□ 1.21
FXN-203ENST00000396366 WRNIP1Q96S55 665 aa22.61■■□□□ 1.21
FXN-203ENST00000396366 CSADQ9Y600 493 aa22.61■■□□□ 1.21
FXN-203ENST00000396366 SNCAIPQ9Y6H5 919 aa22.61■■□□□ 1.21
FXN-203ENST00000396366 TESPA1A2RU30 521 aaPredicted RBP22.6■■□□□ 1.21
FXN-203ENST00000396366 FKTNO75072 461 aa22.6■■□□□ 1.21
FXN-203ENST00000396366 GORABQ5T7V8 394 aa22.6■■□□□ 1.21
FXN-203ENST00000396366 ZGPATQ8N5A5 531 aaKnown RBP22.6■■□□□ 1.21
FXN-203ENST00000396366 PANK1Q8TE04 598 aa22.6■■□□□ 1.21
FXN-203ENST00000396366 OTUD5Q96G74 571 aa22.6■■□□□ 1.21
FXN-203ENST00000396366 AK9Q5TCS8 1911 aa22.6■■□□□ 1.21
FXN-203ENST00000396366 PDS5AQ29RF7 1337 aaKnown RBP22.59■■□□□ 1.21
FXN-203ENST00000396366 NOM1Q5C9Z4 860 aaKnown RBP22.59■■□□□ 1.21
FXN-203ENST00000396366 DZIP1Q86YF9 867 aaKnown RBP22.59■■□□□ 1.21
FXN-203ENST00000396366 SPATA5Q8NB90 893 aa22.59■■□□□ 1.21
FXN-203ENST00000396366 ZNF384Q8TF68 577 aa22.59■■□□□ 1.21
FXN-203ENST00000396366 GAKO14976 1311 aa22.58■■□□□ 1.21
FXN-203ENST00000396366 SURF6O75683 361 aaKnown RBP22.58■■□□□ 1.21
FXN-203ENST00000396366 INPP5BP32019 993 aa22.58■■□□□ 1.21
FXN-203ENST00000396366 MECOMQ03112 1051 aa22.58■■□□□ 1.21
FXN-203ENST00000396366 CRHR2Q13324 411 aa22.58■■□□□ 1.21
FXN-203ENST00000396366 BRI3BPQ8WY22 251 aa22.58■■□□□ 1.21
FXN-203ENST00000396366 RPAP1Q9BWH6 1393 aaPredicted RBP22.58■■□□□ 1.21
FXN-203ENST00000396366 RGS3P49796 1198 aa22.57■■□□□ 1.2
FXN-203ENST00000396366 OS9Q13438 667 aaPredicted RBP22.57■■□□□ 1.2
FXN-203ENST00000396366 DCAF15Q66K64 600 aa22.57■■□□□ 1.2
FXN-203ENST00000396366 SPTY2D1Q68D10 685 aaPredicted RBP22.57■■□□□ 1.2
FXN-203ENST00000396366 HOOK2Q96ED9 719 aa22.57■■□□□ 1.2
FXN-203ENST00000396366 ZNF341Q9BYN7 854 aa22.57■■□□□ 1.2
FXN-203ENST00000396366 CCL15-CCL14A0A0B4J2E2 113 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 SPDYE5A6NIY4 337 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 ARID4AP29374 1257 aaPredicted RBP22.56■■□□□ 1.2
FXN-203ENST00000396366 MCAMP43121 646 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 CCL15Q16663 113 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 TNNI3KQ59H18 835 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 HPS5Q9UPZ3 1129 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 FPGT-TNNI3KV9GXZ4 949 aa22.56■■□□□ 1.2
FXN-203ENST00000396366 SLURP2P0DP57 97 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 BTDP43251 543 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 RGS19P49795 217 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 GTF2A2P52657 109 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 OTUD7BQ6GQQ9 843 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 SH3BP5LQ7L8J4 393 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 ERO1BQ86YB8 467 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 FAM43AQ8N2R8 423 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 FAM163AQ96GL9 167 aaPredicted RBP22.55■■□□□ 1.2
FXN-203ENST00000396366 DBNDD2Q9BQY9 259 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 SNRKQ9NRH2 765 aa22.55■■□□□ 1.2
FXN-203ENST00000396366 IRF6O14896 467 aa22.54■■□□□ 1.2
FXN-203ENST00000396366 WDHD1O75717 1129 aaPredicted RBP22.54■■□□□ 1.2
FXN-203ENST00000396366 IDI2Q9BXS1 227 aa22.54■■□□□ 1.2
FXN-203ENST00000396366 DDX4Q9NQI0 724 aaKnown RBP22.54■■□□□ 1.2
FXN-203ENST00000396366 ZNF112Q9UJU3 913 aa22.54■■□□□ 1.2
FXN-203ENST00000396366 MROH7-TTC4A0A0A0MT08 1334 aa22.54■■□□□ 1.2
FXN-203ENST00000396366 SOX10P56693 466 aa22.53■■□□□ 1.2
FXN-203ENST00000396366 CEP85Q6P2H3 762 aa22.53■■□□□ 1.2
FXN-203ENST00000396366 NSUN4Q96CB9 384 aaKnown RBP22.53■■□□□ 1.2
FXN-203ENST00000396366 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
FXN-203ENST00000396366 RAI14Q9P0K7 980 aa22.53■■□□□ 1.2
FXN-203ENST00000396366 NOP58Q9Y2X3 529 aaKnown RBP22.53■■□□□ 1.2
FXN-203ENST00000396366 RFX7Q2KHR2 1363 aa22.52■■□□□ 1.2
FXN-203ENST00000396366 GPR75-ASB3A0A0A6YYF3 556 aa22.52■■□□□ 1.2
FXN-203ENST00000396366 DDTLA6NHG4 134 aaPredicted RBP22.52■■□□□ 1.2
FXN-203ENST00000396366 ENTPD3O75355 529 aa22.52■■□□□ 1.2
FXN-203ENST00000396366 CAP1Q01518 475 aa22.52■■□□□ 1.2
FXN-203ENST00000396366 PICALMQ13492 652 aa22.52■■□□□ 1.2
FXN-203ENST00000396366 PKN2Q16513 984 aaKnown RBP22.52■■□□□ 1.2
FXN-203ENST00000396366 SLF2Q8IX21 1173 aa22.52■■□□□ 1.2
FXN-203ENST00000396366 UQCRFS1P1P0C7P4 283 aa22.51■■□□□ 1.19
FXN-203ENST00000396366 RHBDL3P58872 404 aa22.51■■□□□ 1.19
FXN-203ENST00000396366 TTC39AQ5SRH9 613 aa22.51■■□□□ 1.19
FXN-203ENST00000396366 CD99L2Q8TCZ2 262 aa22.51■■□□□ 1.19
FXN-203ENST00000396366 TLR7Q9NYK1 1049 aaKnown RBP22.51■■□□□ 1.19
FXN-203ENST00000396366 ATRNL1Q5VV63 1379 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms