RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SPRED3Q2MJR0 410 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TBC1D10BQ4KMP7 808 aaPredicted RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 DGKKQ5KSL6 1271 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 SPDYAQ5MJ70 313 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 RNF20Q5VTR2 975 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM2GQ5VZR2 741 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 OLFML2BQ68BL8 750 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 OGFOD3Q6PK18 319 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 RNF207Q6ZRF8 634 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 ADGRG3Q86Y34 549 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 FIBCD1Q8N539 461 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 C1orf127Q8N9H9 656 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 C2CD4AQ8NCU7 369 aaPredicted RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 SMG8Q8ND04 991 aaKnown RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 ADAM32Q8TC27 787 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TRPM4Q8TD43 1214 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 MYLIPQ8WY64 445 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PLD4Q96BZ4 506 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 XAGE2Q96GT9 111 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 INTS4Q96HW7 963 aaKnown RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CEP63Q96MT8 703 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PWWP2AQ96N64 755 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PRRX2Q99811 253 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CARD10Q9BWT7 1032 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 RNF32Q9H0A6 362 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CSRNP2Q9H175 543 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TNKS2Q9H2K2 1166 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 DEF6Q9H4E7 631 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 OSBPL3Q9H4L5 887 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF552Q9H707 407 aaPredicted RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CARS2Q9HA77 564 aaKnown RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 SUGCTQ9HAC7 445 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CWC22Q9HCG8 908 aaKnown RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CYP4F12Q9HCS2 524 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 EPB41L4AQ9HCS5 686 aaPredicted RBP0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 BRD7Q9NPI1 651 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 SLC2A4RGQ9NR83 387 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TXLNGQ9NUQ3 528 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 MDFICQ9P1T7 246 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 RNF7Q9UBF6 113 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 FBLN5Q9UBX5 448 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 FKBPLQ9UIM3 349 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 GPSM3Q9Y4H4 160 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TESMINQ9Y4I5 508 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PPME1Q9Y570 386 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 MMP24Q9Y5R2 645 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 DUSP10Q9Y6W6 482 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 OTOGLQ3ZCN5 2332 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 A0A1W2PNU3 283 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 MYADML2A6NDP7 307 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NPEPPSL1A6NEC2 478 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 PRSS47A8MTI9 375 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 LINC01387J3KSC0 135 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TM4SF5O14894 197 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 FSCN2O14926 492 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 DDX3YO15523 660 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 PER1O15534 1290 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TBC1D4O60343 1298 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NOBOXO60393 691 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 CBFA2T3O75081 653 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 RHOBTB3O94955 611 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 MYCP01106 439 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 GHRHP01286 108 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 HPXP02790 462 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NFICP08651 508 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM87AP0C7U9 286 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 FBLN1P23142 703 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TKTP29401 623 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SCTRP47872 440 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NOVP48745 357 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 CLCN7P51798 805 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SMTNP53814 917 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 EPHB3P54753 998 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NRLP54845 237 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 MLLT6P55198 1093 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 OXCT1P55809 520 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SRSF3P84103 164 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 MLLT1Q03111 559 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 COL10A1Q03692 680 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SOX4Q06945 474 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 FKBP8Q14318 412 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ICAM4Q14773 271 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 R3HDM1Q15032 1099 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NKX1-1Q15270 411 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 LSM12Q3MHD2 195 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 NRN1LQ496H8 165 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF628Q5EBL2 1059 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 IGFL4Q6B9Z1 124 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 CDPF1Q6NVV7 123 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF585AQ6P3V2 769 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TXNDC11Q6PKC3 985 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 LIPIQ6XZB0 460 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 Q6ZTC4 211 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 GAREM2Q75VX8 874 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 DHX32Q7L7V1 743 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 HDGFL2Q7Z4V5 671 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM129CQ86XR2 697 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TREML1Q86YW5 311 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZSCAN29Q8IWY8 852 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 LILRA2Q8N149 483 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms