RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 IFNL1Q8IU54 200 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 ANKRD13AQ8IZ07 590 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 GNL3LQ9NVN8 582 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 HMG20BQ9P0W2 317 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 MAST3O60307 1309 aa13.61□□□□□ -0.23
EXOSC1-202ENST00000370885 TNRC18O15417 2968 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 UNCXA6NJT0 531 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 CCDC85CA6NKD9 419 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 GPR25O00155 361 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 ZBTB48P10074 688 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 TNNI2P48788 182 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 TCP10Q12799 353 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 FKBP1CQ5VVH2 108 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 ZKSCAN4Q969J2 545 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 OPTNQ96CV9 577 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 CFHR5Q9BXR6 569 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 SNCAIPQ9Y6H5 919 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 GAKO14976 1311 aa13.6□□□□□ -0.23
EXOSC1-202ENST00000370885 TESPA1A2RU30 521 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 SREBF2Q12772 1141 aa13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 FAM151AQ8WW52 585 aa13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 ABCF2Q9UG63 623 aa13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 AKAP2Q9Y2D5 859 aa13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-202ENST00000370885 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.23
EXOSC1-202ENST00000370885 CENPFP49454 3210 aa13.58□□□□□ -0.23
EXOSC1-202ENST00000370885 ARID4AP29374 1257 aaPredicted RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 INPP5BP32019 993 aa13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 MCAMP43121 646 aa13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 BRI3BPQ8WY22 251 aa13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 DDX4Q9NQI0 724 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 MYO5AQ9Y4I1 1855 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 ATRNL1Q5VV63 1379 aa13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
EXOSC1-202ENST00000370885 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 RHBDL3P58872 404 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 MECOMQ03112 1051 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 CEP85Q6P2H3 762 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 WRNIP1Q96S55 665 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 TMOD2Q9NZR1 351 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
EXOSC1-202ENST00000370885 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 RGS3P49796 1198 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 NSUN4Q96CB9 384 aaKnown RBP13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 OTUD5Q96G74 571 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 ZNF112Q9UJU3 913 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
EXOSC1-202ENST00000370885 GPR75-ASB3A0A0A6YYF3 556 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 DDTLA6NHG4 134 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 BTDP43251 543 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 INHBEP58166 350 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 CRHR2Q13324 411 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 DZIP1Q86YF9 867 aaKnown RBP13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 DBNLQ9UJU6 430 aaKnown RBP13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 MROH7-TTC4A0A0A0MT08 1334 aa13.55□□□□□ -0.24
EXOSC1-202ENST00000370885 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 IRF6O14896 467 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 FKTNO75072 461 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 RGS19P49795 217 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 GORABQ5T7V8 394 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 C20orf194Q5TEA3 1177 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 ZGPATQ8N5A5 531 aaKnown RBP13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 EXOC6BQ9Y2D4 811 aa13.54□□□□□ -0.24
EXOSC1-202ENST00000370885 DOCK2Q92608 1830 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 CCL15-CCL14A0A0B4J2E2 113 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 ALDH1A1P00352 501 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 CYP2E1P05181 493 aaPredicted RBP13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 MOGSQ13724 837 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 CCL15Q16663 113 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 ADGRA1Q86SQ6 560 aa13.53□□□□□ -0.24
EXOSC1-202ENST00000370885 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms