RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 PHKG2P15735 406 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 PPARDQ03181 441 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 TRIM22Q8IYM9 498 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 SMYD4Q8IYR2 804 aaPredicted RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 RBM6P78332 1123 aaKnown RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 AEBP2Q6ZN18 517 aaPredicted RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 PXDNQ92626 1479 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 GPS2Q13227 327 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 DHX8Q14562 1220 aaKnown RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 FKBP15Q5T1M5 1219 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 SMARCE1Q969G3 411 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 RTEL1Q9NZ71 1219 aa12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
NECTIN4-201ENST00000368012 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 DSCC1Q9BVC3 393 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 DIP2AQ14689 1571 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 LRP2BPQ9P2M1 347 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 NWD1Q149M9 1564 aa12.65□□□□□ -0.38
NECTIN4-201ENST00000368012 PRDM1O75626 825 aa12.65□□□□□ -0.39
NECTIN4-201ENST00000368012 ENGASEQ8NFI3 743 aa12.65□□□□□ -0.39
NECTIN4-201ENST00000368012 PLIN2Q99541 437 aa12.65□□□□□ -0.39
NECTIN4-201ENST00000368012 RAI14Q9P0K7 980 aa12.65□□□□□ -0.39
NECTIN4-201ENST00000368012 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.39
NECTIN4-201ENST00000368012 CDKL5O76039 1030 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 TPM1P09493 284 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 NBPF11Q86T75 865 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 AKAP2Q9Y2D5 859 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 ZNF569Q5MCW4 686 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 ARMT1Q9H993 441 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
NECTIN4-201ENST00000368012 ANKRD65E5RJM6 399 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 CCP110O43303 1012 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 KIF23Q02241 960 aaPredicted RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 PPP2R3AQ06190 1150 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 NR5A1Q13285 461 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 MTF1Q14872 753 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 WWC2Q6AWC2 1192 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 SARM1Q6SZW1 724 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 C10orf67Q8IYJ2 551 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 ANGEL1Q9UNK9 670 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 CYP27B1O15528 508 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 OAS2P29728 719 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 KRBA2Q6ZNG9 492 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 RBM43Q6ZSC3 357 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 DIS3L2Q8IYB7 885 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 MAGEB6Q8N7X4 407 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 PNMA6AP0CW24 399 aaPredicted RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 ERCC3P19447 782 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 CDC25BP30305 580 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 DNA2P51530 1060 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 VPS18Q9P253 973 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 PPP2R2CQ9Y2T4 447 aa12.63□□□□□ -0.39
NECTIN4-201ENST00000368012 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 NYAP1Q6ZVC0 841 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 ZNF446Q9NWS9 450 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 JAG2Q9Y219 1238 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 ZNF532Q9HCE3 1301 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 JAKMIP3Q5VZ66 844 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 APPBP2Q92624 585 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 WDR24Q96S15 920 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 VPS16Q9H269 839 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 IMPACTQ9P2X3 320 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 MBD4O95243 580 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 YEATS4O95619 227 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 CMA1P23946 247 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 GRIN1Q05586 938 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 FILIP1LQ4L180 1135 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 NBPF14Q5TI25 921 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 TOGARAM2Q6ZUX3 1019 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms