RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 GPR108Q9NPR9 543 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 TLR7Q9NYK1 1049 aaKnown RBP16.86■□□□□ 0.29
TPM4-202ENST00000344824 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
TPM4-202ENST00000344824 ANGEL1Q9UNK9 670 aaKnown RBP16.86■□□□□ 0.29
TPM4-202ENST00000344824 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 PPP2R3BQ9Y5P8 575 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
TPM4-202ENST00000344824 MCAMP43121 646 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 AACSQ86V21 672 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 BEGAINQ9BUH8 593 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 SNRKQ9NRH2 765 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
TPM4-202ENST00000344824 PDS5AQ29RF7 1337 aaKnown RBP16.84■□□□□ 0.29
TPM4-202ENST00000344824 NBPF12Q5TAG4 269 aaPredicted RBP16.84■□□□□ 0.29
TPM4-202ENST00000344824 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
TPM4-202ENST00000344824 HHIPL2Q6UWX4 724 aa16.84■□□□□ 0.29
TPM4-202ENST00000344824 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
TPM4-202ENST00000344824 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
TPM4-202ENST00000344824 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
TPM4-202ENST00000344824 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
TPM4-202ENST00000344824 NUCB1Q02818 461 aa16.83■□□□□ 0.28
TPM4-202ENST00000344824 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.28
TPM4-202ENST00000344824 NOGQ13253 232 aa16.83■□□□□ 0.28
TPM4-202ENST00000344824 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
TPM4-202ENST00000344824 RAI14Q9P0K7 980 aa16.83■□□□□ 0.28
TPM4-202ENST00000344824 FOXN1O15353 648 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
TPM4-202ENST00000344824 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 SLC10A3P09131 477 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 RGS3P49796 1198 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 APOBEC3HQ6NTF7 200 aaKnown RBP16.82■□□□□ 0.28
TPM4-202ENST00000344824 CHD1LQ86WJ1 897 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 RASAL3Q86YV0 1011 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 CDAN1Q8IWY9 1227 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
TPM4-202ENST00000344824 ZIC5Q96T25 663 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
TPM4-202ENST00000344824 SLF2Q8IX21 1173 aa16.81■□□□□ 0.28
TPM4-202ENST00000344824 LRP2BPQ9P2M1 347 aa16.81■□□□□ 0.28
TPM4-202ENST00000344824 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
TPM4-202ENST00000344824 FAM155AB1AL88 458 aaPredicted RBP16.8■□□□□ 0.28
TPM4-202ENST00000344824 MAP2K2P36507 400 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 MECOMQ03112 1051 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 TCP10Q12799 353 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 CLASRPQ8N2M8 674 aaKnown RBP16.8■□□□□ 0.28
TPM4-202ENST00000344824 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 MRIQ9BWK5 157 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 WBP1LQ9NX94 342 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 MROH7-TTC4A0A0A0MT08 1334 aa16.8■□□□□ 0.28
TPM4-202ENST00000344824 BTDP43251 543 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 IREB2P48200 963 aaKnown RBP16.79■□□□□ 0.28
TPM4-202ENST00000344824 KIF23Q02241 960 aaPredicted RBP16.79■□□□□ 0.28
TPM4-202ENST00000344824 CDC42EP5Q6NZY7 148 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 MYH7P12883 1935 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 CASP8AP2Q9UKL3 1982 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
TPM4-202ENST00000344824 PDE4AP27815 886 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 ZAP70P43403 619 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
TPM4-202ENST00000344824 GAKO14976 1311 aa16.78■□□□□ 0.28
TPM4-202ENST00000344824 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
TPM4-202ENST00000344824 GSTO1P78417 241 aa16.78■□□□□ 0.28
TPM4-202ENST00000344824 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
TPM4-202ENST00000344824 NFIAQ12857 509 aa16.78■□□□□ 0.28
TPM4-202ENST00000344824 PICALMQ13492 652 aa16.78■□□□□ 0.28
TPM4-202ENST00000344824 TEPSINQ96N21 525 aa16.78■□□□□ 0.28
TPM4-202ENST00000344824 FOCADQ5VW36 1801 aa16.77■□□□□ 0.28
TPM4-202ENST00000344824 RPAP1Q9BWH6 1393 aaPredicted RBP16.77■□□□□ 0.27
TPM4-202ENST00000344824 ZBTB22O15209 634 aa16.77■□□□□ 0.27
TPM4-202ENST00000344824 LBX1P52954 281 aa16.77■□□□□ 0.27
TPM4-202ENST00000344824 OTUD7AQ8TE49 926 aaPredicted RBP16.77■□□□□ 0.27
TPM4-202ENST00000344824 NSUN4Q96CB9 384 aaKnown RBP16.77■□□□□ 0.27
TPM4-202ENST00000344824 CLMNQ96JQ2 1002 aa16.77■□□□□ 0.27
TPM4-202ENST00000344824 NOL10Q9BSC4 688 aaKnown RBP16.77■□□□□ 0.27
TPM4-202ENST00000344824 CYP2E1P05181 493 aaPredicted RBP16.76■□□□□ 0.27
TPM4-202ENST00000344824 LDHCP07864 332 aa16.76■□□□□ 0.27
TPM4-202ENST00000344824 NAA16Q6N069 864 aaPredicted RBP16.76■□□□□ 0.27
TPM4-202ENST00000344824 FAM83AQ86UY5 434 aa16.76■□□□□ 0.27
TPM4-202ENST00000344824 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
TPM4-202ENST00000344824 LAMB1P07942 1786 aa16.76■□□□□ 0.27
TPM4-202ENST00000344824 USP2O75604 605 aaPredicted RBP16.75■□□□□ 0.27
TPM4-202ENST00000344824 IDH1O75874 414 aaKnown RBP16.75■□□□□ 0.27
TPM4-202ENST00000344824 HSPA8P11142 646 aaKnown RBP16.75■□□□□ 0.27
TPM4-202ENST00000344824 FKBP1CQ5VVH2 108 aa16.75■□□□□ 0.27
TPM4-202ENST00000344824 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
TPM4-202ENST00000344824 ZNF384Q8TF68 577 aa16.75■□□□□ 0.27
TPM4-202ENST00000344824 FAM151AQ8WW52 585 aa16.75■□□□□ 0.27
TPM4-202ENST00000344824 SLC10A4Q96EP9 437 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms