RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PIGBQ92521 554 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 ESR2Q92731 530 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 LSG1Q9H089 658 aaKnown RBP7.43□□□□□ -1.22
HMG20A-201ENST00000336216 OSBPL3Q9H4L5 887 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 KCNJ14Q9UNX9 436 aa7.43□□□□□ -1.22
HMG20A-201ENST00000336216 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 E7EWF7 191 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 FGAP02671 866 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 HSPD1P10809 573 aaKnown RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 ATP5JP18859 108 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 PTPN12Q05209 780 aaKnown RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 C10orf67Q8IYJ2 551 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 NEK11Q8NG66 645 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 ZSCAN16Q9H4T2 348 aaPredicted RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 KAT14Q9H8E8 782 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 RNF216Q9NWF9 866 aaPredicted RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 MAGEC2Q9UBF1 373 aaPredicted RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 CCNL1Q9UK58 526 aaPredicted RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 MAPK8IP1Q9UQF2 711 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 FMN2Q9NZ56 1722 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 PDE8AO60658 829 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 HLFQ16534 295 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 HEATR3Q7Z4Q2 680 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 DHX58Q96C10 678 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 CLSTN2Q9H4D0 955 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 CABP5Q9NP86 173 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 DCCP43146 1447 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 TSPY3P0CV98 308 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 TSPY8P0CW00 308 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 GNG11P61952 73 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 MCM6Q14566 821 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 C11orf57Q6ZUT1 292 aaPredicted RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 BRINP3Q76B58 766 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 MRPS27Q92552 414 aaKnown RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 APPBP2Q92624 585 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 CEP89Q96ST8 783 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 UBA5Q9GZZ9 404 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 SPTLC3Q9NUV7 552 aa7.42□□□□□ -1.22
HMG20A-201ENST00000336216 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
HMG20A-201ENST00000336216 PHACTR2O75167 634 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 TOP1P11387 765 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 ZNF76P36508 570 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 EIF5P55010 431 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 PDE4BQ07343 736 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 FAM47AQ5JRC9 791 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 FBXO38Q6PIJ6 1188 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 LRRC8AQ8IWT6 810 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 V9GY48 417 aaPredicted RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 C1orf167Q5SNV9 1468 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 TOPAZ1Q8N9V7 1692 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 ECM2O94769 699 aaPredicted RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 UBA7P41226 1012 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 GABPB1Q06547 395 aaPredicted RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 GOLGA8FQ08AF8 430 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 GOLGA8DPQ0D2H9 430 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 NOM1Q5C9Z4 860 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 CAGE1Q8TC20 777 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 EEF2KMTQ96G04 330 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 CRNKL1Q9BZJ0 848 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 CCDC87Q9NVE4 849 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 SSH2Q76I76 1423 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 VIRMAQ69YN4 1812 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 DLG5Q8TDM6 1919 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
HMG20A-201ENST00000336216 ERO1AQ96HE7 468 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 CARD6Q9BX69 1037 aa7.41□□□□□ -1.22
HMG20A-201ENST00000336216 KDRP35968 1356 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 BAG3O95817 575 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 MCM7P33993 719 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 ZNF174Q15697 407 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 KMT5BQ4FZB7 885 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 HSP90B2PQ58FF3 399 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 DEF6Q9H4E7 631 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 STAP2Q9UGK3 403 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 PEAK1Q9H792 1746 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 LOC102724428A0A0B4J2F2 783 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 FAM170AA1A519 330 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 ERVV-2B6SEH9 535 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 NEMFO60524 1076 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 SIK1P57059 783 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 FAM193AP78312 1265 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 RBM26Q5T8P6 1007 aaKnown RBP7.4□□□□□ -1.22
HMG20A-201ENST00000336216 SPATA5Q8NB90 893 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
HMG20A-201ENST00000336216 COPRSQ9NQ92 184 aa7.4□□□□□ -1.22
HMG20A-201ENST00000336216 SEC31AO94979 1220 aaKnown RBP7.4□□□□□ -1.23
HMG20A-201ENST00000336216 KARSQ15046 597 aaKnown RBP7.4□□□□□ -1.23
HMG20A-201ENST00000336216 ZFYVE27Q5T4F4 411 aa7.4□□□□□ -1.23
HMG20A-201ENST00000336216 LEKR1Q6ZMV7 388 aa7.4□□□□□ -1.23
HMG20A-201ENST00000336216 MAP4K1Q92918 833 aa7.4□□□□□ -1.23
HMG20A-201ENST00000336216 OSBP2Q969R2 916 aa7.4□□□□□ -1.23
HMG20A-201ENST00000336216 EPC1Q9H2F5 836 aa7.4□□□□□ -1.23
HMG20A-201ENST00000336216 ANGEL1Q9UNK9 670 aaKnown RBP7.4□□□□□ -1.23
HMG20A-201ENST00000336216 RPAP1Q9BWH6 1393 aaPredicted RBP7.4□□□□□ -1.23
HMG20A-201ENST00000336216 NRKQ7Z2Y5 1582 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms