RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 HSPA4P34932 840 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 PPP2R5BQ15173 497 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 SNX14Q9Y5W7 946 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 KLHDC4Q8TBB5 520 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 KCNH3Q9ULD8 1083 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 AKR1B15C9JRZ8 316 aaPredicted RBP18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 TBC1D8BQ0IIM8 1120 aa18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 DIS3L2Q8IYB7 885 aaKnown RBP18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 V9GYY5 206 aaPredicted RBP18.66■□□□□ 0.58
NSMCE3-201ENST00000332303 IVLP07476 585 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 POLD1P28340 1107 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 GJC1P36383 396 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 BAG1Q99933 345 aaPredicted RBP18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 HSPA2P54652 639 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 SYT10Q6XYQ8 523 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 GSTA5Q7RTV2 222 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 SSX2IPQ9Y2D8 614 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 UFL1O94874 794 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 TNNC1P63316 161 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 TTC14Q96N46 770 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 ARMT1Q9H993 441 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 V9GY48 417 aaPredicted RBP18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 KIF4AO95239 1232 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 GCKRQ14397 625 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 LPIN2Q92539 896 aa18.65■□□□□ 0.58
NSMCE3-201ENST00000332303 LGR6Q9HBX8 967 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 CCDC122Q5T0U0 273 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 FAM227BQ96M60 508 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 CEP63Q96MT8 703 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 A1BGP04217 495 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 CAPZA3Q96KX2 299 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 MTRF1LQ9UGC7 380 aaKnown RBP18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 USP19O94966 1318 aa18.64■□□□□ 0.57
NSMCE3-201ENST00000332303 PPP1R9BQ96SB3 815 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 PPM1FP49593 454 aaPredicted RBP18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 FAM212AQ96EL1 285 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 MTUS1Q9ULD2 1270 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 CLEC11AQ9Y240 323 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 HAUS3Q68CZ6 603 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 ZBTB21Q9ULJ3 1066 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 FRMD4BQ9Y2L6 1034 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 CUTAO60888 179 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 PDE4DQ08499 809 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 RAPGEF1Q13905 1077 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 SUCLG2Q96I99 432 aa18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
NSMCE3-201ENST00000332303 TRIM14Q14142 442 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 DCAF17Q5H9S7 520 aaPredicted RBP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 CCDC50Q8IVM0 306 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 VTI1AQ96AJ9 217 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 PAIP2Q9BPZ3 127 aaKnown RBP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 NCOA5Q9HCD5 579 aaKnown RBP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 PNMA6EA0A0J9YXQ4 647 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 TMEM110-MUSTN1A8MSY1 372 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 CCT6AP40227 531 aaKnown RBP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 VWA3BQ502W6 1294 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 CNNM4Q6P4Q7 775 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 ORAI2Q96SN7 254 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 MAST3O60307 1309 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 ZNF594Q96JF6 807 aaPredicted RBP18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 GPCPD1Q9NPB8 672 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 ATP2C2O75185 946 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 PRDM1O75626 825 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 IGSF22Q8N9C0 903 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 MLKLQ8NB16 471 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 PSMD1Q99460 953 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 GGA1Q9UJY5 639 aa18.62■□□□□ 0.57
NSMCE3-201ENST00000332303 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 CALCOCO2Q13137 446 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 PIK3AP1Q6ZUJ8 805 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 TSGA10Q9BZW7 698 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 ZNF354CQ86Y25 554 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 ZNF496Q96IT1 587 aaPredicted RBP18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 IBTKQ9P2D0 1353 aaPredicted RBP18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 FCHSD1Q86WN1 690 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 TIGD1Q96MW7 591 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
NSMCE3-201ENST00000332303 CAPN2P17655 700 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 SP4Q02446 784 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 CETN3O15182 167 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 RSPH14Q9UHP6 348 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 TTC38Q5R3I4 469 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 RHOXF2BP0C7M4 288 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 DPH6Q7L8W6 267 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 ANKS4BQ8N8V4 417 aa18.6■□□□□ 0.57
NSMCE3-201ENST00000332303 RHOXF2Q9BQY4 288 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms