RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 RNF214Q8ND24 703 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 CHURC1Q8WUH1 139 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 SEL1L2Q5TEA6 688 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 PPP2R3CQ969Q6 453 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 JADE2Q9NQC1 790 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 SUPT20HL1Q3ZLR7 823 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 TTC41PQ6P2S7 1318 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 MXRA7P84157 204 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 CTR9Q6PD62 1173 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 KRT26Q7Z3Y9 468 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
MED28-201ENST00000237380 MCM9Q9NXL9 1143 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 RABGAP1Q9Y3P9 1069 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 PHLPP2Q6ZVD8 1323 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 IFT122Q9HBG6 1241 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 AKR1B10O60218 316 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 ERCC5P28715 1186 aaPredicted RBP8.32□□□□□ -1.08
MED28-201ENST00000237380 CNNM4Q6P4Q7 775 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 NUDT18Q6ZVK8 323 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 BCRP11274 1271 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 NT5C2P49902 561 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 GOLGA5Q8TBA6 731 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 PNMA3Q9UL41 463 aa8.32□□□□□ -1.08
MED28-201ENST00000237380 CCDC26Q8TAB7 109 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 IL1RAPL2Q9NP60 686 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 SHANK2Q9UPX8 1470 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 ITIH3Q06033 890 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 KIF1BO60333 1816 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 TRIM14Q14142 442 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 ARHGAP45Q92619 1136 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 HSPA8P11142 646 aaKnown RBP8.31□□□□□ -1.08
MED28-201ENST00000237380 FLT4P35916 1363 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
MED28-201ENST00000237380 RIMS2Q9UQ26 1411 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 SYKP43405 635 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 UBL4BQ8N7F7 174 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 GNPATO15228 680 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 PRPF6O94906 941 aaKnown RBP8.31□□□□□ -1.08
MED28-201ENST00000237380 GNA14O95837 355 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 PAXBP1Q9Y5B6 917 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 TACC3Q9Y6A5 838 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 C1orf228Q6PIY5 440 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 HVCN1Q96D96 273 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 ZRANB1Q9UGI0 708 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
MED28-201ENST00000237380 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 ABCC1P33527 1531 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 KDM3AQ9Y4C1 1321 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 SV2BQ7L1I2 683 aa8.31□□□□□ -1.08
MED28-201ENST00000237380 PSPC1Q8WXF1 523 aaKnown RBP8.31□□□□□ -1.08
MED28-201ENST00000237380 RNF187Q5TA31 235 aaPredicted RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 GBP6Q6ZN66 633 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 BRAPQ7Z569 592 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 NDUFAF2Q8N183 169 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 ZMYM3Q14202 1370 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 TRIM75PA6NK02 468 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 PLCB3Q01970 1234 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 DLGAP5Q15398 846 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 MICU3Q86XE3 530 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 SLC12A6Q9UHW9 1150 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 CALCOCO2Q13137 446 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 KSR2Q6VAB6 950 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 ZBTB8OSQ8IWT0 167 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 ZNF408Q9H9D4 720 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 N4BP3O15049 544 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 SRRTQ9BXP5 876 aaKnown RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 VCXQ9H320 206 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 ACEP12821 1306 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 A0A1B0GVL5 298 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 ZKSCAN3Q9BRR0 538 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 AP5M1Q9H0R1 490 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 HEXIM1O94992 359 aaKnown RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 EAPPQ56P03 285 aaPredicted RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 TEX11Q8IYF3 940 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 MROH5Q6ZUA9 1318 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 UVSSAQ2YD98 709 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 MTIF3Q9H2K0 278 aaKnown RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 ADD3Q9UEY8 706 aaKnown RBP8.3□□□□□ -1.08
MED28-201ENST00000237380 USP21Q9UK80 565 aa8.3□□□□□ -1.08
MED28-201ENST00000237380 TUBB2AQ13885 445 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 E2F5Q15329 346 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 PUM3Q15397 648 aaKnown RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 FAM160B1Q5W0V3 765 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 TUBB2BQ9BVA1 445 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 PPARGP37231 505 aaPredicted RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 UBE2HP62256 183 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 EFCAB13Q8IY85 973 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 HSPA4P34932 840 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 CCDC129Q6ZRS4 1044 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ARFGAP2Q8N6H7 521 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms