RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Klf15Q9EPW2 415 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pet2A2AHY8 747 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Heatr4E9Q357 955 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Sh3tc1G3X9F6 1346 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Akr1b8P45377 316 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cadps2Q8BYR5 1297 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 4933428M09RikQ9D3X3 192 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 MycnP03966 462 aaKnown RBP11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Eps15P42567 897 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Trim37Q6PCX9 961 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ttc41Q692V3 1318 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 ByslO54825 436 aaKnown RBP11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Sde2Q8K1J5 448 aaKnown RBP11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Terf2ipQ91VL8 393 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Rilpl1Q9JJC6 406 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gm5624F6ZZG8 207 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Agbl1Q09M05 972 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Hand2Q61039 217 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pde5aQ8CG03 865 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Usp54Q8BL06 1588 aaKnown RBP11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gm10110D3Z5M2 615 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 L1td1Q587J6 782 aaKnown RBP11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Tekt3Q6X6Z7 490 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Clasp2Q8BRT1 1286 aaKnown RBP11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gimap5Q8BWF2 308 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Iws1Q8C1D8 766 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Speer2E9Q9U2 264 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 EmbP21995 330 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ctdp1Q7TSG2 960 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Eif4a2P10630 407 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Dzip1Q8BMD2 852 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Bbs5Q9CZQ9 341 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Nop56Q9D6Z1 580 aaKnown RBP11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ankrd35E9Q9D8 996 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ccdc14Q8K2J4 934 aa11.68□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gm5935Q497S0 212 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Q9D5Q8 446 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ublcp1Q8BGR9 318 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 PxdnQ3UQ28 1475 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Atp2b4Q6Q477 1205 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Akap8Q9DBR0 687 aaKnown RBP11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 TnksQ6PFX9 1320 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 FanccP50652 591 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Tm6sf1P58749 370 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Atp8a2P98200 1148 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Kcnh3Q9WVJ0 1095 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Tbc1d2B1AVH7 922 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Atp2a3Q64518 1038 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cabp5Q9JLK3 173 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 HnrnpcQ9Z204 313 aaKnown RBP11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Rreb1Q3UH06 1700 aaKnown RBP11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Traf3ip3Q8C0G2 513 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pik3ap1Q9EQ32 811 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pak1O88643 545 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Becn2P0DM65 447 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Glg1Q61543 1175 aaKnown RBP11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ccdc105Q9D4K7 499 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Col20a1Q923P0 1320 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Arhgef2Q60875 985 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 ThemisQ8BGW0 636 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Fam177a1Q8BR63 207 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Lekr1B2RVN1 116 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pdrg1P59048 133 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Znf365Q8BG89 408 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pak2Q8CIN4 524 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Frat2Q8K025 231 aa11.67□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gm6583E9Q8Z1 469 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cage1Q5IR70 849 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cep83Q9D5R3 692 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 TsksO54887 585 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Mpp4Q6P7F1 635 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ano6Q6P9J9 911 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gm45015A0A140LII9 184 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Eftud2O08810 971 aaKnown RBP11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Prrc2bQ7TPM1 1486 aaKnown RBP11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ppp6r3Q922D4 844 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Appbp2Q9DAX9 585 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ppp1r9aH3BJD6 1292 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ift122Q6NWV3 1182 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 IqceQ6PCQ0 778 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Sept14Q9DA97 430 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ndufa8Q9DCJ5 172 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Trpc3Q9QZC1 836 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Stxbp3Q60770 592 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 MmeQ61391 750 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Exoc3Q6KAR6 755 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Zranb1Q7M760 708 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 VmacQ8BP01 174 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Bicc1Q99MQ1 977 aaKnown RBP11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 PdiltQ9DAN1 588 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Itgb1bp2Q9R000 350 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 AcrbpQ3V140 540 aa11.66□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ccdc57Q6PHN1 1016 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ptcd1Q8C2E4 695 aaKnown RBP11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Bst2Q8R2Q8 172 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ddx27Q921N6 760 aaKnown RBP11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Dnajc21E9Q8D0 531 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Drc3Q9D5E4 523 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cracr2aQ3UP38 310 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Camsap3Q80VC9 1252 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms