RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 JTBO76095 146 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 C8orf88P0DMB2 117 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 CRYBB3P26998 211 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 TMUB2Q71RG4 321 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 HSD17B11Q8NBQ5 300 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 GRAMD2BQ96HH9 432 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 RHPN1-AS1Q9BWJ2 59 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 SLC39A9Q9NUM3 307 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 SMPXQ9UHP9 88 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 HIGD1AQ9Y241 93 aa16.37■□□□□ 0.21
TSPAN9-208ENST00000640568 IGHV3-66A0A0C4DH42 116 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 PLP1P60201 277 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 PRR20EP86478 221 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 PRR20CP86479 221 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 PRR20DP86480 221 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 PRR20BP86481 221 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 PRR20AP86496 221 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 OR1L4Q8NGR5 311 aa16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 TECRQ9NZ01 308 aaKnown RBP16.36■□□□□ 0.21
TSPAN9-208ENST00000640568 LGALSLQ3ZCW2 172 aaPredicted RBP16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 ADAMTSL5Q6ZMM2 481 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 ST8SIA2Q92186 375 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 PFDN5Q99471 154 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 ZNF471Q9BX82 626 aaPredicted RBP16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 ARV1Q9H2C2 271 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 CHEK1O14757 476 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 APOHP02749 345 aaPredicted RBP16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 OXLD1Q5BKU9 147 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 MLXQ9UH92 298 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 TIMM9Q9Y5J7 89 aa16.35■□□□□ 0.21
TSPAN9-208ENST00000640568 ELOA3CA0A087WX78 387 aaPredicted RBP16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 C4BPBP20851 252 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 ATP6V0CP27449 155 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 FFAR4Q5NUL3 377 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 C10orf113Q5VZT2 155 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 LAMTOR1Q6IAA8 161 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 GNPNAT1Q96EK6 184 aaPredicted RBP16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 VSIRQ9H7M9 311 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 SELENOKQ9Y6D0 94 aa16.34■□□□□ 0.21
TSPAN9-208ENST00000640568 IGLV1-51P01701 117 aa16.33■□□□□ 0.2
TSPAN9-208ENST00000640568 EIF5AP63241 154 aaKnown RBP16.33■□□□□ 0.2
TSPAN9-208ENST00000640568 DEFB114Q30KQ6 69 aa16.33■□□□□ 0.2
TSPAN9-208ENST00000640568 DNAJC4Q9NNZ3 241 aa16.33■□□□□ 0.2
TSPAN9-208ENST00000640568 CYTL1Q9NRR1 136 aa16.33■□□□□ 0.2
TSPAN9-208ENST00000640568 CD300EQ496F6 205 aaPredicted RBP16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 RBPMS2Q6ZRY4 209 aaKnown RBP16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 LINC00305Q7Z4B0 112 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 OR2K2Q8NGT1 345 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 UHRF2Q96PU4 802 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 RNF2Q99496 336 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 PSMG3Q9BT73 122 aaPredicted RBP16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 SLC25A39Q9BZJ4 359 aaPredicted RBP16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 SLC25A22Q9H936 323 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 RNF24Q9Y225 148 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 U3KQE9 123 aa16.32■□□□□ 0.2
TSPAN9-208ENST00000640568 G3V4G9 280 aa16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 BUB3O43684 328 aa16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 NKX2-5P52952 324 aaPredicted RBP16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 LCN12Q6JVE5 192 aa16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 C9orf62Q8N4C0 152 aa16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 GATAD1Q8WUU5 269 aa16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 NOTCH3Q9UM47 2321 aa16.31■□□□□ 0.2
TSPAN9-208ENST00000640568 H3BRN7 92 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 CD5P06127 495 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 RPL11P62913 178 aaKnown RBP16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 ACOT6Q3I5F7 207 aaPredicted RBP16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 C16orf54Q6UWD8 224 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 PATE2Q6UY27 113 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 TCF24Q7RTU0 167 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 OR8I2Q8N0Y5 310 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 TMEM37Q8WXS4 190 aa16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 ZMAT5Q9UDW3 170 aaKnown RBP16.3■□□□□ 0.2
TSPAN9-208ENST00000640568 ZNF98A6NK75 572 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 WIPF1O43516 503 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 SAMD5Q5TGI4 173 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 SHANK2-AS3Q9BTD1 123 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 SCRT1Q9BWW7 348 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 SH3BGRL3Q9H299 93 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 SLC25A32Q9H2D1 315 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 RFNGQ9Y644 331 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 TRAV25A0A0B4J276 109 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 HELTA6NFD8 242 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 TPT1P13693 172 aaKnown RBP16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 SERF2P84101 59 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 GCSAMLQ5JQS6 135 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 C1orf194Q5T5A4 169 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 OR2G3Q8NGZ4 309 aa16.29■□□□□ 0.2
TSPAN9-208ENST00000640568 IGKV3-7A0A075B6H7 116 aa16.28■□□□□ 0.2
TSPAN9-208ENST00000640568 FAM78BQ5VT40 261 aa16.28■□□□□ 0.2
TSPAN9-208ENST00000640568 LEMD1Q68G75 181 aa16.28■□□□□ 0.2
TSPAN9-208ENST00000640568 SIGLEC15Q6ZMC9 328 aa16.28■□□□□ 0.2
TSPAN9-208ENST00000640568 TMEM61Q8N0U2 210 aa16.28■□□□□ 0.2
TSPAN9-208ENST00000640568 GLMPQ8WWB7 406 aa16.28■□□□□ 0.2
TSPAN9-208ENST00000640568 MBP02144 154 aa16.27■□□□□ 0.19
TSPAN9-208ENST00000640568 M6PRP20645 277 aa16.27■□□□□ 0.19
TSPAN9-208ENST00000640568 PAFAH1B2P68402 229 aa16.27■□□□□ 0.19
TSPAN9-208ENST00000640568 GUCA2BQ16661 112 aa16.27■□□□□ 0.19
TSPAN9-208ENST00000640568 PKD1L1Q8TDX9 2849 aa16.26■□□□□ 0.19
TSPAN9-208ENST00000640568 IZUMO1RA6ND01 250 aa16.26■□□□□ 0.19
TSPAN9-208ENST00000640568 SLC51BQ86UW2 128 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms