RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 FUT9Q9Y231 359 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 TSSC4Q9Y5U2 329 aaPredicted RBP7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 A0A1W2PPV4 95 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 H2AFB1P0C5Y9 115 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 RPEL1Q2QD12 228 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 AWAT1Q58HT5 328 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 MORN5Q5VZ52 161 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 UNQ9165/PRO28630Q6UXU0 137 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 LINC00305Q7Z4B0 112 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 GPHB5Q86YW7 130 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 TMEM190Q8WZ59 177 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
CACNA1A-223ENST00000636058 IGHV3OR16-8A0A075B7F1 116 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 TRAV1-1A0A0B4J248 108 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 MAP1LC3B2A6NCE7 125 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 NUDT19A8MXV4 375 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 LINC01619G3V211 115 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 H3BRN7 92 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 STAG3L3P0CL85 134 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 ZP3P21754 424 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 FHL3Q13643 280 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 DEFB136Q30KP8 78 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 LCN15Q6UWW0 184 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 C8orf86Q6ZUL3 223 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 OR11H1Q8NG94 326 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 OR1N2Q8NGR9 330 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 SFT2D1Q8WV19 159 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 SHANK2-AS3Q9BTD1 123 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 SLC25A39Q9BZJ4 359 aaPredicted RBP7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 MAP1LC3BQ9GZQ8 125 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
CACNA1A-223ENST00000636058 TRAV5A0A0B4J249 113 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 A0A1W2PRX2 142 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 LGALS9O00182 355 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 HBE1P02100 147 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 C8orf88P0DMB2 117 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 CRYBB3P26998 211 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 TAS2R45P59539 299 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 KLF5Q13887 457 aaPredicted RBP7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 REC114Q7Z4M0 266 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 S100A7AQ86SG5 101 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 NDUFA11Q86Y39 141 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 C1QL4Q86Z23 238 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 RAX2Q96IS3 184 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 METTL26Q96S19 204 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 C20orf24Q9BUV8 137 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 SCRT1Q9BWW7 348 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 SLC25A2Q9BXI2 301 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 HRH4Q9H3N8 390 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 TECRQ9NZ01 308 aaKnown RBP7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
CACNA1A-223ENST00000636058 ZNF320A2RRD8 509 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 ZNF98A6NK75 572 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 A8MWP6 167 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 K7EMT4 169 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 BUB3O43684 328 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 CXorf1O96002 111 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 ARL14EPLP0DKL9 152 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 NPPCP23582 126 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 S100A7P31151 101 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 FGF8P55075 233 aaPredicted RBP7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 CCL20P78556 96 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 KHDC3LQ587J8 217 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 LEMD1Q68G75 181 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 PQLC2Q6ZP29 291 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 DPF1Q92782 380 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 ZNF503Q96F45 646 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 DUX3Q96PT4 197 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 CITED1Q99966 193 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 DAZ1Q9NQZ3 744 aaKnown RBP7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 UFC1Q9Y3C8 167 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 U3KQE9 123 aa7.32□□□□□ -1.24
CACNA1A-223ENST00000636058 A0A1B0GV50 99 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 LINC00862A6NCI5 91 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 TEX46H3BTG2 121 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 CCL24O00175 119 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 ZNF207O43670 478 aaKnown RBP7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 APOHP02749 345 aaPredicted RBP7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 GP9P14770 177 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 SLURP1P55000 103 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 SYNJ2BPP57105 145 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 LURAP1LQ8IV03 231 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 STXBP6Q8NFX7 210 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 MED9Q9NWA0 146 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 TMEM14CQ9P0S9 112 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
CACNA1A-223ENST00000636058 IGHV7-4-1A0A0J9YVY3 117 aa7.3□□□□□ -1.24
CACNA1A-223ENST00000636058 TMEM213A2RRL7 107 aa7.3□□□□□ -1.24
CACNA1A-223ENST00000636058 MRPS12O15235 138 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms