RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MPDU1O75352 247 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 MEOX2P50222 304 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 SNRPD3P62318 126 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 BAXQ07812 192 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 OR2F1Q13607 317 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 HAGHQ16775 308 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 ODF3L2Q3SX64 289 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 SIGLEC15Q6ZMC9 328 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 KIR2DL5AQ8N109 375 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 TMEM252Q8N6L7 170 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 KIR2DL5BQ8NHK3 375 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 C11orf1Q9H5F2 150 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 UQCC1Q9NVA1 299 aa10.44□□□□□ -0.74
SNRPA1-216ENST00000626000 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 GALR1P47211 349 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 TFPI2P48307 235 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 PLP1P60201 277 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 GBGT1Q8N5D6 347 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 ASCL2Q99929 193 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 SELENOKQ9Y6D0 94 aa10.43□□□□□ -0.74
SNRPA1-216ENST00000626000 K7EQG2 157 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 HYPMO75409 117 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 CST7O76096 145 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 LINC00869P0C866 280 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 H2BFSP57053 126 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 VWC2Q2TAL6 325 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 OR1B1Q8NGR6 318 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 PPP1R1CQ8WVI7 109 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 WWC2-AS2Q96NR7 200 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 MAP6D1Q9H9H5 199 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 KCNIP2Q9NS61 270 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 HIGD1AQ9Y241 93 aa10.42□□□□□ -0.74
SNRPA1-216ENST00000626000 ELOA3CA0A087WX78 387 aaPredicted RBP10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 ORM2P19652 201 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 ID1P41134 155 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 LRRC37A5PQ49AS3 106 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 Q6ZRG5 221 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 WFDC3Q8IUB2 231 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 TMEM217Q8N7C4 229 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 DCANP1Q8TF63 244 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 CHAC2Q8WUX2 184 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 MED28Q9H204 178 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 WDR83OSQ9Y284 106 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 TP53TG1Q9Y2A0 90 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 ALG5Q9Y673 324 aa10.41□□□□□ -0.74
SNRPA1-216ENST00000626000 AGPAT2O15120 278 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 CCNKO75909 580 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 SIX6O95475 246 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 MPC2O95563 127 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 RPL7P18124 248 aaKnown RBP10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 CAMLGP49069 296 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 FGL1Q08830 312 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 Q6ZWC4 215 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 PFDN5Q99471 154 aa10.4□□□□□ -0.74
SNRPA1-216ENST00000626000 COL7A1Q02388 2944 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 IGSF23A1L1A6 192 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 ZNF98A6NK75 572 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 OR5G3P0C626 314 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 PSMB3P49720 205 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 DEFB131AP59861 70 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 EWSR1Q01844 656 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 STHQ8IWL8 128 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 SHANK2-AS3Q9BTD1 123 aa10.39□□□□□ -0.75
SNRPA1-216ENST00000626000 UBE2L5PA0A1B0GUS4 154 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 H3BRN7 92 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 ISLRO14498 428 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 RPL29P47914 159 aaKnown RBP10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 MORN3Q6PF18 240 aaPredicted RBP10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 OR1L4Q8NGR5 311 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 SLC25A39Q9BZJ4 359 aaPredicted RBP10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 ARL6Q9H0F7 186 aa10.38□□□□□ -0.75
SNRPA1-216ENST00000626000 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 SPP1P10451 314 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 GATA2P23769 480 aaPredicted RBP10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 NUTF2P61970 127 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 OXA1LQ15070 435 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 APRG1Q8IVJ8 170 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 OR5C1Q8NGR4 320 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 MGST2Q99735 147 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 SLC25A22Q9H936 323 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
SNRPA1-216ENST00000626000 C17orf112F2Z3M2 114 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms