RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
MUC1-229ENST00000620770 TECRQ9NZ01 308 aaKnown RBP10.2□□□□□ -0.78
MUC1-229ENST00000620770 A0A1W2PS18 150 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 COX7A2P2O60397 106 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 MPDU1O75352 247 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 CFDP00746 253 aaPredicted RBP10.19□□□□□ -0.78
MUC1-229ENST00000620770 RPL11P62913 178 aaKnown RBP10.19□□□□□ -0.78
MUC1-229ENST00000620770 RBPMS2Q6ZRY4 209 aaKnown RBP10.19□□□□□ -0.78
MUC1-229ENST00000620770 TCF24Q7RTU0 167 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 TMEM61Q8N0U2 210 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 ZNF709Q8N972 641 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 PRR25Q96S07 402 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 RNF2Q99496 336 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 TMEM231Q9H6L2 316 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 AURKAIP1Q9NWT8 199 aaPredicted RBP10.19□□□□□ -0.78
MUC1-229ENST00000620770 HIGD1AQ9Y241 93 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 PXMP4Q9Y6I8 212 aa10.19□□□□□ -0.78
MUC1-229ENST00000620770 HYPMO75409 117 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 B2MP61769 119 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 VSIRQ9H7M9 311 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 SLC25A22Q9H936 323 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
MUC1-229ENST00000620770 ZNF256Q9Y2P7 627 aaPredicted RBP10.18□□□□□ -0.78
MUC1-229ENST00000620770 C17orf112F2Z3M2 114 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 GP9P14770 177 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 RPL29P47914 159 aaKnown RBP10.17□□□□□ -0.78
MUC1-229ENST00000620770 TFPI2P48307 235 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 PRR20EP86478 221 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 PRR20CP86479 221 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 PRR20DP86480 221 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 PRR20BP86481 221 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 PRR20AP86496 221 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 EGFEM1PQ0D2K5 195 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 ZNF266Q14584 549 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 LEMD1Q68G75 181 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 LAMTOR1Q6IAA8 161 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 Q6ZRG5 221 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 GBGT1Q8N5D6 347 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 HSD17B11Q8NBQ5 300 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 OR2K2Q8NGT1 345 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 SCRT1Q9BWW7 348 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 KCNIP2Q9NS61 270 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 PFDN2Q9UHV9 154 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 RFNGQ9Y644 331 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 U3KQE9 123 aa10.17□□□□□ -0.78
MUC1-229ENST00000620770 BORCS7-ASMTA0A0B4J1R7 106 aa10.16□□□□□ -0.78
MUC1-229ENST00000620770 HMSDA8MTL9 139 aa10.16□□□□□ -0.78
MUC1-229ENST00000620770 C1QBP02746 253 aa10.16□□□□□ -0.78
MUC1-229ENST00000620770 CXCL2P19875 107 aa10.16□□□□□ -0.78
MUC1-229ENST00000620770 RPL7L1Q6DKI1 246 aaKnown RBP10.16□□□□□ -0.78
MUC1-229ENST00000620770 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
MUC1-229ENST00000620770 ARV1Q9H2C2 271 aa10.16□□□□□ -0.78
MUC1-229ENST00000620770 H3BRN7 92 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 BUB3O43684 328 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 PFDN1O60925 122 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 PLP1P60201 277 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 ZNF345Q14585 488 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 ZFP69Q49AA0 526 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 FFAR4Q5NUL3 377 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 PXDC1Q5TGL8 231 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 PATE2Q6UY27 113 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 WFDC3Q8IUB2 231 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 KCNRGQ8N5I3 272 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 STXBP6Q8NFX7 210 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 GLMPQ8WWB7 406 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 ARPC5LQ9BPX5 153 aa10.15□□□□□ -0.78
MUC1-229ENST00000620770 SLC25A39Q9BZJ4 359 aaPredicted RBP10.15□□□□□ -0.78
MUC1-229ENST00000620770 ZMAT5Q9UDW3 170 aaKnown RBP10.15□□□□□ -0.78
MUC1-229ENST00000620770 TRAV25A0A0B4J276 109 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 KANTRA0A1W2PQU2 76 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 ZNF98A6NK75 572 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 S100A7P31151 101 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 SIGLEC15Q6ZMC9 328 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 LINC00305Q7Z4B0 112 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 OR8I2Q8N0Y5 310 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 OR1L4Q8NGR5 311 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 TMEM37Q8WXS4 190 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 PFDN5Q99471 154 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 NEURL2Q9BR09 285 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 SHANK2-AS3Q9BTD1 123 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 PARD6GQ9BYG4 376 aaPredicted RBP10.14□□□□□ -0.79
MUC1-229ENST00000620770 SLC25A32Q9H2D1 315 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 DNAH3Q8TD57 4116 aa10.14□□□□□ -0.79
MUC1-229ENST00000620770 ELOA3CA0A087WX78 387 aaPredicted RBP10.13□□□□□ -0.79
MUC1-229ENST00000620770 A0A0D9SG52 128 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 HELTA6NFD8 242 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 ZNF785A8K8V0 405 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 DNASE2O00115 360 aaPredicted RBP10.13□□□□□ -0.79
MUC1-229ENST00000620770 TAAR5O14804 337 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 TSPAN4O14817 238 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 BCL2L11O43521 198 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 ATP6V0CP27449 155 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 CD81P60033 236 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 MORN5Q5VZ52 161 aa10.13□□□□□ -0.79
MUC1-229ENST00000620770 FAM90A2PQ658T7 463 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms