RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
NEK3-210ENST00000620675 METTL26Q96S19 204 aa10.28□□□□□ -0.76
NEK3-210ENST00000620675 SIGLEC8Q9NYZ4 499 aa10.28□□□□□ -0.76
NEK3-210ENST00000620675 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
NEK3-210ENST00000620675 FBN3Q75N90 2809 aa10.28□□□□□ -0.76
NEK3-210ENST00000620675 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.76
NEK3-210ENST00000620675 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.76
NEK3-210ENST00000620675 MCRIP2Q9BUT9 160 aaKnown RBP10.27□□□□□ -0.76
NEK3-210ENST00000620675 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.76
NEK3-210ENST00000620675 VSIRQ9H7M9 311 aa10.27□□□□□ -0.76
NEK3-210ENST00000620675 RABAC1Q9UI14 185 aa10.27□□□□□ -0.76
NEK3-210ENST00000620675 WIPF1O43516 503 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 FABP1P07148 127 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 HNRNPCP07910 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
NEK3-210ENST00000620675 OR5G3P0C626 314 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 RPL29P47914 159 aaKnown RBP10.27□□□□□ -0.77
NEK3-210ENST00000620675 B2MP61769 119 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 SELENOTP62341 195 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 SCRT1Q9BWW7 348 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
NEK3-210ENST00000620675 BUB3O43684 328 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
NEK3-210ENST00000620675 IFNA5P01569 189 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 PLP1P60201 277 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 RAB31Q13636 194 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 ZNF345Q14585 488 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 LAMTOR1Q6IAA8 161 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 ARV1Q9H2C2 271 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 MPDU1O75352 247 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 TMUB2Q71RG4 321 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 MARC2Q969Z3 335 aa10.26□□□□□ -0.77
NEK3-210ENST00000620675 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 HYPMO75409 117 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 ZFP69Q49AA0 526 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 SPATA31B1PQ5VZV4 182 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 FAM90A2PQ658T7 463 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 SCGB1C1Q8TD33 95 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 SLC25A39Q9BZJ4 359 aaPredicted RBP10.25□□□□□ -0.77
NEK3-210ENST00000620675 SLC25A22Q9H936 323 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
NEK3-210ENST00000620675 INSL3P51460 131 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 EGFEM1PQ0D2K5 195 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 TCF24Q7RTU0 167 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 GBGT1Q8N5D6 347 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 PRR25Q96S07 402 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
NEK3-210ENST00000620675 HIGD1AQ9Y241 93 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 ZNF98A6NK75 572 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 H3BRN7 92 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 SNRPCP09234 159 aaKnown RBP10.24□□□□□ -0.77
NEK3-210ENST00000620675 ZNF266Q14584 549 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 HYLS1Q96M11 299 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 C17orf77Q96MU5 243 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 ARPC5LQ9BPX5 153 aa10.24□□□□□ -0.77
NEK3-210ENST00000620675 A0A0D9SG52 128 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 BCL2L11O43521 198 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 COX7A2P2O60397 106 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 CFDP00746 253 aaPredicted RBP10.23□□□□□ -0.77
NEK3-210ENST00000620675 TFPI2P48307 235 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 Q6ZRG5 221 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 LINC00305Q7Z4B0 112 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 ZNF709Q8N972 641 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 SLC25A32Q9H2D1 315 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 SEPSECSQ9HD40 501 aaKnown RBP10.23□□□□□ -0.77
NEK3-210ENST00000620675 DNAJC4Q9NNZ3 241 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 TECRQ9NZ01 308 aaKnown RBP10.23□□□□□ -0.77
NEK3-210ENST00000620675 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
NEK3-210ENST00000620675 BOLA2-SMG1P6H3BVE0 249 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 RAB2AP61019 212 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 GUCA2BQ16661 112 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
NEK3-210ENST00000620675 C10orf113Q5VZT2 155 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 SHANK2-AS3Q9BTD1 123 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 PFDN1O60925 122 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 FAM24BQ8N5W8 94 aa10.22□□□□□ -0.77
NEK3-210ENST00000620675 ZNF471Q9BX82 626 aaPredicted RBP10.22□□□□□ -0.77
NEK3-210ENST00000620675 A0A1W2PS18 150 aa10.21□□□□□ -0.77
NEK3-210ENST00000620675 TAAR5O14804 337 aa10.21□□□□□ -0.77
NEK3-210ENST00000620675 RPL11P62913 178 aaKnown RBP10.21□□□□□ -0.77
NEK3-210ENST00000620675 RBPMS2Q6ZRY4 209 aaKnown RBP10.21□□□□□ -0.77
NEK3-210ENST00000620675 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
NEK3-210ENST00000620675 WFDC10AQ9H1F0 79 aa10.21□□□□□ -0.77
NEK3-210ENST00000620675 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.77
NEK3-210ENST00000620675 COL7A1Q02388 2944 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 BORCS7-ASMTA0A0B4J1R7 106 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 KANTRA0A1W2PQU2 76 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 C17orf112F2Z3M2 114 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 CD7P09564 240 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 GP9P14770 177 aa10.21□□□□□ -0.78
NEK3-210ENST00000620675 FAM78BQ5VT40 261 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms