RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 GADD45GO95257 159 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 ANP32AP39687 249 aaKnown RBP0.58□□□□□ -2.32
U6.42-201ENST00000618440 ROMO1P60602 79 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 KRR1Q13601 381 aaKnown RBP0.58□□□□□ -2.32
U6.42-201ENST00000618440 GDF5OSQ5U4N7 250 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 DHRS4L2Q6PKH6 230 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 PDZD9Q8IXQ8 264 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 DGCR14Q96DF8 476 aaKnown RBP0.58□□□□□ -2.32
U6.42-201ENST00000618440 MRPL57Q9BQC6 102 aaKnown RBP0.58□□□□□ -2.32
U6.42-201ENST00000618440 LINC00467Q9BRT7 94 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 RASL12Q9NYN1 266 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 FAM32AQ9Y421 112 aaKnown RBP0.58□□□□□ -2.32
U6.42-201ENST00000618440 PIK3C2AO00443 1686 aa0.58□□□□□ -2.32
U6.42-201ENST00000618440 B4DSR2 109 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 M0R378 163 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 TIMM17BO60830 172 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 DHFRP00374 187 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 RHOBP62745 196 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 EIF5AP63241 154 aaKnown RBP0.57□□□□□ -2.32
U6.42-201ENST00000618440 MRPS15P82914 257 aaKnown RBP0.57□□□□□ -2.32
U6.42-201ENST00000618440 TAF1AQ15573 450 aaPredicted RBP0.57□□□□□ -2.32
U6.42-201ENST00000618440 SPRNQ5BIV9 151 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 KRTAP26-1Q6PEX3 210 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 PXT1Q8NFP0 134 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 C9orf16Q9BUW7 83 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 IMUPQ9GZP8 106 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 OPTCQ9UBM4 332 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 MYH3P11055 1940 aa0.57□□□□□ -2.32
U6.42-201ENST00000618440 EIF3AQ14152 1382 aaKnown RBP0.57□□□□□ -2.32
U6.42-201ENST00000618440 TRGV10A0A0A0MS01 117 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 TMEM256-PLSCR3K7ERE1 68 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 TAX1BP3O14907 124 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 HMGB3O15347 200 aaKnown RBP0.56□□□□□ -2.32
U6.42-201ENST00000618440 NDUFB3O43676 98 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 IFNA7P01567 189 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 SRP14P37108 136 aaKnown RBP0.56□□□□□ -2.32
U6.42-201ENST00000618440 ARF6P62330 175 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 MPV17LQ2QL34 196 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 PATE2Q6UY27 113 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 ZNF833PQ6ZTB9 187 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 YPEL2Q96QA6 119 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 CDC42SE1Q9NRR8 79 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 ARL5AQ9Y689 179 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 CNTRLQ7Z7A1 2325 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 HEATR1Q9H583 2144 aaKnown RBP0.56□□□□□ -2.32
U6.42-201ENST00000618440 FBN2P35556 2912 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 MYO5AQ9Y4I1 1855 aaKnown RBP0.56□□□□□ -2.32
U6.42-201ENST00000618440 PTPRFP10586 1907 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 EML5Q05BV3 1969 aa0.56□□□□□ -2.32
U6.42-201ENST00000618440 CD109Q6YHK3 1445 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 CECR2Q9BXF3 1484 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 CEP164Q9UPV0 1460 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 TRBV6-4A0A1B0GX49 114 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 CCDC160A6NGH7 325 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 A8MWV9 139 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 CCL16O15467 120 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 GGCTO75223 188 aaKnown RBP0.55□□□□□ -2.32
U6.42-201ENST00000618440 IGLV1-51P01701 117 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 UBE2BP63146 152 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 CLECL1Q8IZS7 167 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 EXOC3-AS1Q8N2X6 119 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 OR10K1Q8NGX5 313 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 CANT1Q8WVQ1 401 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 C4orf3Q8WVX3 66 aa0.55□□□□□ -2.32
U6.42-201ENST00000618440 KDM6AO15550 1401 aaPredicted RBP0.55□□□□□ -2.32
U6.42-201ENST00000618440 ZNF25P17030 456 aaPredicted RBP0.54□□□□□ -2.32
U6.42-201ENST00000618440 NCALDP61601 193 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 TMED2Q15363 201 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 BCL2L15Q5TBC7 163 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 TEX261Q6UWH6 196 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 TMEM254Q8TBM7 123 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 TEX37Q96LM6 180 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 GPER1Q99527 375 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 SLC25A21Q9BQT8 299 aaPredicted RBP0.54□□□□□ -2.32
U6.42-201ENST00000618440 C6orf62Q9GZU0 229 aaPredicted RBP0.54□□□□□ -2.32
U6.42-201ENST00000618440 ACER3Q9NUN7 267 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 U3KQ87 197 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 RFX7Q2KHR2 1363 aa0.54□□□□□ -2.32
U6.42-201ENST00000618440 MYO18AQ92614 2054 aaKnown RBP0.53□□□□□ -2.32
U6.42-201ENST00000618440 ANKRD31Q8N7Z5 1873 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 A0A087WSZ3 146 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 TCRBV4S1A1TA0A5B7 111 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 CCL25O15444 150 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 ATP5HO75947 161 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 DYNLT3P51808 116 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 DSCR4P56555 118 aaPredicted RBP0.53□□□□□ -2.32
U6.42-201ENST00000618440 GRINAQ7Z429 371 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 LINC00052Q96N35 136 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 MED29Q9NX70 200 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 PRNDQ9UKY0 176 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 PYCARDQ9ULZ3 195 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 UHRF1BP1Q6BDS2 1440 aa0.53□□□□□ -2.32
U6.42-201ENST00000618440 CAMSAP2Q08AD1 1489 aa0.53□□□□□ -2.33
U6.42-201ENST00000618440 ZCCHC11Q5TAX3 1644 aaKnown RBP0.53□□□□□ -2.33
U6.42-201ENST00000618440 TLCD2A6NGC4 264 aa0.52□□□□□ -2.33
U6.42-201ENST00000618440 E7EUB6 86 aa0.52□□□□□ -2.33
U6.42-201ENST00000618440 ATG12O94817 140 aa0.52□□□□□ -2.33
U6.42-201ENST00000618440 CRHP06850 196 aa0.52□□□□□ -2.33
U6.42-201ENST00000618440 MRPS25P82663 173 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms