RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MLXQ9UH92 298 aa17.15■□□□□ 0.34
CBWD3-213ENST00000618217 NBEAL1Q6ZS30 2694 aa17.15■□□□□ 0.34
CBWD3-213ENST00000618217 IGHV3-49A0A0A0MS15 119 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 CHEK1O14757 476 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 ZNF266Q14584 549 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 DEFB114Q30KQ6 69 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 ZNF767PQ75MW2 155 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 RHPN1-AS1Q9BWJ2 59 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 TAAR5O14804 337 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 SAMD5Q5TGI4 173 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 RPL7L1Q6DKI1 246 aaKnown RBP17.14■□□□□ 0.33
CBWD3-213ENST00000618217 PATE2Q6UY27 113 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 ZNF680Q8NEM1 530 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 SCGB1C1Q8TD33 95 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 RSG1Q9BU20 258 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 SLC39A9Q9NUM3 307 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 RABAC1Q9UI14 185 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 PXMP4Q9Y6I8 212 aa17.14■□□□□ 0.33
CBWD3-213ENST00000618217 IGHV3OR16-13A0A075B7E8 117 aa17.13■□□□□ 0.33
CBWD3-213ENST00000618217 IGHV3-74A0A0B4J1X5 117 aa17.13■□□□□ 0.33
CBWD3-213ENST00000618217 ORM2P19652 201 aa17.13■□□□□ 0.33
CBWD3-213ENST00000618217 ST8SIA2Q92186 375 aa17.13■□□□□ 0.33
CBWD3-213ENST00000618217 TECRQ9NZ01 308 aaKnown RBP17.13■□□□□ 0.33
CBWD3-213ENST00000618217 RFNGQ9Y644 331 aa17.13■□□□□ 0.33
CBWD3-213ENST00000618217 NOTCH1P46531 2555 aa17.13■□□□□ 0.33
CBWD3-213ENST00000618217 G3V4G9 280 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 HYPMO75409 117 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 IFNA7P01567 189 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 B2MP61769 119 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 PXDC1Q5TGL8 231 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 OR1B1Q8NGR6 318 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 GPR61Q9BZJ8 451 aa17.12■□□□□ 0.33
CBWD3-213ENST00000618217 ZNF709Q8N972 641 aa17.11■□□□□ 0.33
CBWD3-213ENST00000618217 TMEM37Q8WXS4 190 aa17.11■□□□□ 0.33
CBWD3-213ENST00000618217 DOK5Q9P104 306 aa17.11■□□□□ 0.33
CBWD3-213ENST00000618217 SELENOKQ9Y6D0 94 aa17.11■□□□□ 0.33
CBWD3-213ENST00000618217 IGHV3-66A0A0C4DH42 116 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 BUB3O43684 328 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 RNF2Q99496 336 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 ARV1Q9H2C2 271 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 SORL1Q92673 2214 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 BORCS7-ASMTA0A0B4J1R7 106 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 A0A1W2PS18 150 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 C17orf112F2Z3M2 114 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 JTBO76095 146 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 CD300EQ496F6 205 aaPredicted RBP17.1■□□□□ 0.33
CBWD3-213ENST00000618217 Q6ZRG5 221 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 DYNLRB2Q8TF09 96 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 UBQLN2Q9UHD9 624 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 TIMM9Q9Y5J7 89 aa17.1■□□□□ 0.33
CBWD3-213ENST00000618217 IZUMO1RA6ND01 250 aa17.09■□□□□ 0.33
CBWD3-213ENST00000618217 FAM90A2PQ658T7 463 aa17.09■□□□□ 0.33
CBWD3-213ENST00000618217 HSD17B11Q8NBQ5 300 aa17.09■□□□□ 0.33
CBWD3-213ENST00000618217 DNAJC4Q9NNZ3 241 aa17.09■□□□□ 0.33
CBWD3-213ENST00000618217 KCNIP2Q9NS61 270 aa17.09■□□□□ 0.33
CBWD3-213ENST00000618217 HIGD1AQ9Y241 93 aa17.09■□□□□ 0.33
CBWD3-213ENST00000618217 ELOA3CA0A087WX78 387 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-213ENST00000618217 OR5G3P0C626 314 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 TPT1P13693 172 aaKnown RBP17.08■□□□□ 0.32
CBWD3-213ENST00000618217 ATP6V0CP27449 155 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 EGFEM1PQ0D2K5 195 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 GCSAMLQ5JQS6 135 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 C16orf54Q6UWD8 224 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 ALKAL2Q6UX46 152 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 STOML3Q8TAV4 291 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 UHRF2Q96PU4 802 aa17.08■□□□□ 0.32
CBWD3-213ENST00000618217 SLC25A39Q9BZJ4 359 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-213ENST00000618217 TMEM61Q8N0U2 210 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 OR2K2Q8NGT1 345 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 GLMPQ8WWB7 406 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 NARS2Q96I59 477 aaKnown RBP17.07■□□□□ 0.32
CBWD3-213ENST00000618217 SHANK2-AS3Q9BTD1 123 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 PFDN2Q9UHV9 154 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 ZNF98A6NK75 572 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 H3BRN7 92 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 COX7A2P2O60397 106 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 BMI1P35226 326 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 C1orf194Q5T5A4 169 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 KPRPQ5T749 579 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-213ENST00000618217 PSMG3Q9BT73 122 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-213ENST00000618217 SH3BGRL3Q9H299 93 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 TMEM231Q9H6L2 316 aa17.07■□□□□ 0.32
CBWD3-213ENST00000618217 KRTAP10-11P60412 298 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 EIF5AP63241 154 aaKnown RBP17.06■□□□□ 0.32
CBWD3-213ENST00000618217 C10orf113Q5VZT2 155 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 OR1L4Q8NGR5 311 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 OR2G3Q8NGZ4 309 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 GATAD1Q8WUU5 269 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 GRAMD2BQ96HH9 432 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 PFDN5Q99471 154 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 SCRT1Q9BWW7 348 aa17.06■□□□□ 0.32
CBWD3-213ENST00000618217 TRAV25A0A0B4J276 109 aa17.05■□□□□ 0.32
CBWD3-213ENST00000618217 ZNF785A8K8V0 405 aa17.05■□□□□ 0.32
CBWD3-213ENST00000618217 FFAR4Q5NUL3 377 aa17.05■□□□□ 0.32
CBWD3-213ENST00000618217 MORN5Q5VZ52 161 aa17.05■□□□□ 0.32
CBWD3-213ENST00000618217 LINC00305Q7Z4B0 112 aa17.05■□□□□ 0.32
CBWD3-213ENST00000618217 BAP18Q8IXM2 172 aa17.05■□□□□ 0.32
CBWD3-213ENST00000618217 GNPNAT1Q96EK6 184 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-213ENST00000618217 BEAN1Q3B7T3 259 aa17.04■□□□□ 0.32
CBWD3-213ENST00000618217 LEMD1Q68G75 181 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms