RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CITED2Q99967 270 aaPredicted RBP13.5□□□□□ -0.25
SREK1-216ENST00000612404 C20orf24Q9BUV8 137 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 MAP1LC3BQ9GZQ8 125 aa13.5□□□□□ -0.25
SREK1-216ENST00000612404 TENM1Q9UKZ4 2725 aa13.49□□□□□ -0.25
SREK1-216ENST00000612404 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
SREK1-216ENST00000612404 I3L521 148 aa13.49□□□□□ -0.25
SREK1-216ENST00000612404 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
SREK1-216ENST00000612404 RNF2Q99496 336 aa13.49□□□□□ -0.25
SREK1-216ENST00000612404 ZFAND3Q9H8U3 227 aa13.49□□□□□ -0.25
SREK1-216ENST00000612404 IGHV4OR15-8A0A075B7B6 117 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 A0A087WW49 117 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 ZNF320A2RRD8 509 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 FOXL1Q12952 345 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 RPEL1Q2QD12 228 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 MORN5Q5VZ52 161 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 MBD3L1Q8WWY6 194 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 MRPL32Q9BYC8 188 aaKnown RBP13.48□□□□□ -0.25
SREK1-216ENST00000612404 MRPL27Q9P0M9 148 aaKnown RBP13.48□□□□□ -0.25
SREK1-216ENST00000612404 TSSC4Q9Y5U2 329 aaPredicted RBP13.48□□□□□ -0.25
SREK1-216ENST00000612404 NDUFA4O00483 81 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 RABAC1Q9UI14 185 aa13.48□□□□□ -0.25
SREK1-216ENST00000612404 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
SREK1-216ENST00000612404 ZNF207O43670 478 aaKnown RBP13.47□□□□□ -0.25
SREK1-216ENST00000612404 HSPB1P04792 205 aaKnown RBP13.47□□□□□ -0.25
SREK1-216ENST00000612404 LEMD1Q68G75 181 aa13.47□□□□□ -0.25
SREK1-216ENST00000612404 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
SREK1-216ENST00000612404 SLC25A39Q9BZJ4 359 aaPredicted RBP13.47□□□□□ -0.25
SREK1-216ENST00000612404 HBE1P02100 147 aa13.46□□□□□ -0.25
SREK1-216ENST00000612404 FAM106AQ4KMX7 169 aa13.46□□□□□ -0.25
SREK1-216ENST00000612404 C8orf86Q6ZUL3 223 aa13.46□□□□□ -0.25
SREK1-216ENST00000612404 TECRQ9NZ01 308 aaKnown RBP13.46□□□□□ -0.25
SREK1-216ENST00000612404 ARL14EPLP0DKL9 152 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 C8orf88P0DMB2 117 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 TAS2R45P59539 299 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 S100A7AQ86SG5 101 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 OR11H1Q8NG94 326 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 DUX3Q96PT4 197 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 SCRT1Q9BWW7 348 aa13.46□□□□□ -0.26
SREK1-216ENST00000612404 OR7C2O60412 319 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 STAG3L2P0CL84 134 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 STAG3L3P0CL85 134 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 KRTAP10-3P60369 221 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 CCL20P78556 96 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 KHDC3LQ587J8 217 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 OR1N2Q8NGR9 330 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 LYPD6BQ8NI32 183 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 DPF1Q92782 380 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 METTL26Q96S19 204 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 PFDN2Q9UHV9 154 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 TRAV1-1A0A0B4J248 108 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 CXorf1O96002 111 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 HOXD3P31249 432 aaPredicted RBP13.45□□□□□ -0.26
SREK1-216ENST00000612404 GPHB5Q86YW7 130 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 SHANK2-AS3Q9BTD1 123 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 TMPRSS5Q9H3S3 457 aa13.45□□□□□ -0.26
SREK1-216ENST00000612404 FBN1P35555 2871 aaKnown RBP13.44□□□□□ -0.26
SREK1-216ENST00000612404 LINC01619G3V211 115 aa13.44□□□□□ -0.26
SREK1-216ENST00000612404 H3BRN7 92 aa13.44□□□□□ -0.26
SREK1-216ENST00000612404 TMEM190Q8WZ59 177 aa13.44□□□□□ -0.26
SREK1-216ENST00000612404 ZP3P21754 424 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 NPPCP23582 126 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 NSUN5P1Q3KNT7 163 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 KRTAP24-1Q3LI83 254 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 FAM167A-AS1Q96KT0 104 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 IGHV3OR16-13A0A075B7E8 117 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 IGHV3-74A0A0B4J1X5 117 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 ZNF98A6NK75 572 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 S100A7P31151 101 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 SLURP1P55000 103 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 AWAT1Q58HT5 328 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 IL34Q6ZMJ4 242 aa13.43□□□□□ -0.26
SREK1-216ENST00000612404 IGHV3-66A0A0C4DH42 116 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 LINC00862A6NCI5 91 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 OR10J4P0C629 311 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 PQLC2Q6ZP29 291 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 GNG13Q9P2W3 67 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 PYYP10082 97 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 GCHFRP30047 84 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 TM4SF20Q53R12 229 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 COMMD7Q86VX2 200 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 SLC7A5P1Q8MH63 180 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
SREK1-216ENST00000612404 APOHP02749 345 aaPredicted RBP13.41□□□□□ -0.26
SREK1-216ENST00000612404 CRYBB3P26998 211 aa13.41□□□□□ -0.26
SREK1-216ENST00000612404 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
SREK1-216ENST00000612404 ZNF503Q96F45 646 aa13.41□□□□□ -0.26
SREK1-216ENST00000612404 OR51M1Q9H341 326 aa13.41□□□□□ -0.26
SREK1-216ENST00000612404 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
SREK1-216ENST00000612404 WNK1Q9H4A3 2382 aa13.41□□□□□ -0.26
SREK1-216ENST00000612404 SNRPCP09234 159 aaKnown RBP13.4□□□□□ -0.26
SREK1-216ENST00000612404 UBE2L3P68036 154 aaKnown RBP13.4□□□□□ -0.26
SREK1-216ENST00000612404 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 NARS2Q96I59 477 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms