RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 NDUFA11Q86Y39 141 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 OR1L4Q8NGR5 311 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 TMEM37Q8WXS4 190 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 DPF1Q92782 380 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 RAX2Q96IS3 184 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 UHRF2Q96PU4 802 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 CITED1Q99966 193 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 HIGD1AQ9Y241 93 aa8.54□□□□□ -1.04
CTCFL-214ENST00000608108 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
CTCFL-214ENST00000608108 ZNF320A2RRD8 509 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 SLURP1P55000 103 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 FHL3Q13643 280 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 FAM122CQ6P4D5 195 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 PATE2Q6UY27 113 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 RPP25LQ8N5L8 163 aaKnown RBP8.53□□□□□ -1.04
CTCFL-214ENST00000608108 FAM213BQ8TBF2 198 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 GATAD1Q8WUU5 269 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 SLC25A22Q9H936 323 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 SEPSECSQ9HD40 501 aaKnown RBP8.53□□□□□ -1.04
CTCFL-214ENST00000608108 DNAJC4Q9NNZ3 241 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 RABAC1Q9UI14 185 aa8.53□□□□□ -1.04
CTCFL-214ENST00000608108 A0A1W2PPV4 95 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 ZNF705EA8MWA4 302 aaPredicted RBP8.52□□□□□ -1.05
CTCFL-214ENST00000608108 CCL24O00175 119 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 ZNF207O43670 478 aaKnown RBP8.52□□□□□ -1.05
CTCFL-214ENST00000608108 CDC34P49427 236 aaPredicted RBP8.52□□□□□ -1.05
CTCFL-214ENST00000608108 SYNJ2BPP57105 145 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 RHOBP62745 196 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 DPPA3Q6W0C5 159 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 LINC00305Q7Z4B0 112 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 C1QL4Q86Z23 238 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 METTL26Q96S19 204 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 ACTR3CQ9C0K3 210 aaPredicted RBP8.52□□□□□ -1.05
CTCFL-214ENST00000608108 MRPL27Q9P0M9 148 aaKnown RBP8.52□□□□□ -1.05
CTCFL-214ENST00000608108 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
CTCFL-214ENST00000608108 RGS13O14921 159 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 EIF3GO75821 320 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTCFL-214ENST00000608108 SPATA31B1PQ5VZV4 182 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 SSX7Q7RTT5 188 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 RNF2Q99496 336 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 MRPL32Q9BYC8 188 aaKnown RBP8.51□□□□□ -1.05
CTCFL-214ENST00000608108 SLC25A39Q9BZJ4 359 aaPredicted RBP8.51□□□□□ -1.05
CTCFL-214ENST00000608108 DAZ1Q9NQZ3 744 aaKnown RBP8.51□□□□□ -1.05
CTCFL-214ENST00000608108 FUT9Q9Y231 359 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 CTXND1A0A1B0GTU2 59 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 A8MWP6 167 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 SEC14L6B5MCN3 397 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 KLF5Q13887 457 aaPredicted RBP8.51□□□□□ -1.05
CTCFL-214ENST00000608108 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 MORN5Q5VZ52 161 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 MIR17HGQ75NE6 70 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 REC114Q7Z4M0 266 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 S100A7AQ86SG5 101 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 C3orf56Q8N813 242 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 LRRC20Q8TCA0 184 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 PCNPQ8WW12 178 aaKnown RBP8.51□□□□□ -1.05
CTCFL-214ENST00000608108 RAB24Q969Q5 203 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 SHANK2-AS3Q9BTD1 123 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 ZNF747Q9BV97 191 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 UFC1Q9Y3C8 167 aa8.51□□□□□ -1.05
CTCFL-214ENST00000608108 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 H3BRN7 92 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 LGALS9O00182 355 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 HMGB3O15347 200 aaKnown RBP8.5□□□□□ -1.05
CTCFL-214ENST00000608108 NPPCP23582 126 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 CRYBB3P26998 211 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 S100A7P31151 101 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 TM4SF20Q53R12 229 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 LEMD1Q68G75 181 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 DLX4Q92988 240 aaPredicted RBP8.5□□□□□ -1.05
CTCFL-214ENST00000608108 SCRT1Q9BWW7 348 aa8.5□□□□□ -1.05
CTCFL-214ENST00000608108 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 TRAV5A0A0B4J249 113 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 A0A1B0GV50 99 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 TMEM213A2RRL7 107 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 MAP1LC3B2A6NCE7 125 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 ZNF98A6NK75 572 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 K7EMT4 169 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 MYCNOSP40205 109 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 TAS2R45P59539 299 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 RAB14P61106 215 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 BLOC1S1P78537 153 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 OR4F17Q8NGA8 305 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 OR9G4Q8NGQ1 327 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 SFT2D1Q8WV19 159 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 SAT2Q96F10 170 aaPredicted RBP8.49□□□□□ -1.05
CTCFL-214ENST00000608108 NARS2Q96I59 477 aaKnown RBP8.49□□□□□ -1.05
CTCFL-214ENST00000608108 OR4F4Q96R69 305 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 MAP1LC3BQ9GZQ8 125 aa8.49□□□□□ -1.05
CTCFL-214ENST00000608108 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms