RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 E5RGE8 158 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 K7EPK0 472 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 RLN2P04090 185 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 IFNA4P05014 189 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 NUP62P37198 522 aaPredicted RBP8.41□□□□□ -1.06
HIF3A-217ENST00000600236 DEFB131AP59861 70 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 S100A10P60903 97 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 SPCS3P61009 180 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 STHQ8IWL8 128 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 OR11H2Q8NH07 326 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 OR4X1Q8NH49 305 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 OR52E5Q8NH55 327 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 PHLDA1Q8WV24 401 aaPredicted RBP8.41□□□□□ -1.06
HIF3A-217ENST00000600236 ARPC5LQ9BPX5 153 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 C11orf68Q9H3H3 251 aaKnown RBP8.41□□□□□ -1.06
HIF3A-217ENST00000600236 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.41□□□□□ -1.06
HIF3A-217ENST00000600236 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 CACFD1Q9UGQ2 172 aa8.41□□□□□ -1.06
HIF3A-217ENST00000600236 TAAR5O14804 337 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 PITX3O75364 302 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 APOHP02749 345 aaPredicted RBP8.4□□□□□ -1.06
HIF3A-217ENST00000600236 S100A1P23297 94 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 P2RY1P47900 373 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 TMEM41BQ5BJD5 291 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 LEMD1Q68G75 181 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 SLC7A5P1Q8MH63 180 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 OR1S2Q8NGQ3 325 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 FAM210AQ96ND0 272 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 HEYLQ9NQ87 328 aaPredicted RBP8.4□□□□□ -1.06
HIF3A-217ENST00000600236 CYTL1Q9NRR1 136 aa8.4□□□□□ -1.06
HIF3A-217ENST00000600236 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
HIF3A-217ENST00000600236 A0A0G2JRQ6 117 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 HELTA6NFD8 242 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 CRYBB3P26998 211 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 NKX2-1P43699 371 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-217ENST00000600236 RAB14P61106 215 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 ID3Q02535 119 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 BSXQ3C1V8 233 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 MORN3Q6PF18 240 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-217ENST00000600236 SLC24A4Q8NFF2 622 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
HIF3A-217ENST00000600236 Q8WTZ3 238 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-217ENST00000600236 MED9Q9NWA0 146 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 FBXL17Q9UF56 701 aa8.39□□□□□ -1.07
HIF3A-217ENST00000600236 SPP1P10451 314 aa8.38□□□□□ -1.07
HIF3A-217ENST00000600236 TPT1P13693 172 aaKnown RBP8.38□□□□□ -1.07
HIF3A-217ENST00000600236 RPL12P30050 165 aaKnown RBP8.38□□□□□ -1.07
HIF3A-217ENST00000600236 EIF5AP63241 154 aaKnown RBP8.38□□□□□ -1.07
HIF3A-217ENST00000600236 AARDQ4LEZ3 155 aa8.38□□□□□ -1.07
HIF3A-217ENST00000600236 C2orf83Q53S99 150 aa8.38□□□□□ -1.07
HIF3A-217ENST00000600236 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
HIF3A-217ENST00000600236 GPR146Q96CH1 333 aa8.38□□□□□ -1.07
HIF3A-217ENST00000600236 ZNF471Q9BX82 626 aaPredicted RBP8.38□□□□□ -1.07
HIF3A-217ENST00000600236 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
HIF3A-217ENST00000600236 LSM5Q9Y4Y9 91 aaKnown RBP8.38□□□□□ -1.07
HIF3A-217ENST00000600236 FAM90A26D6RGX4 464 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 K7EQG2 157 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 SCGB1D2O95969 90 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 NMBP08949 121 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
HIF3A-217ENST00000600236 RND2P52198 227 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 TCTAP57738 103 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 NANOS2P60321 138 aaKnown RBP8.37□□□□□ -1.07
HIF3A-217ENST00000600236 TIGITQ495A1 244 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 LGALS9CQ6DKI2 356 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 ALKAL2Q6UX46 152 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 Q6ZRM9 215 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 BAP18Q8IXM2 172 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 SLC25A32Q9H2D1 315 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 MRPL36Q9P0J6 103 aaKnown RBP8.37□□□□□ -1.07
HIF3A-217ENST00000600236 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
HIF3A-217ENST00000600236 C11orf94C9JXX5 98 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 IGLC1P0CG04 106 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 NPY1RP25929 384 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 OR10J1P30954 320 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 YPEL3P61236 119 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-217ENST00000600236 MLANAQ16655 118 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
HIF3A-217ENST00000600236 FAM24BQ8N5W8 94 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 LRRC20Q8TCA0 184 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 C2CD4CQ8TF44 421 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 RAB40CQ96S21 281 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 ARV1Q9H2C2 271 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 LYRM2Q9NU23 88 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-217ENST00000600236 PFDN2Q9UHV9 154 aa8.36□□□□□ -1.07
HIF3A-217ENST00000600236 EPPK1P58107 5090 aaKnown RBP8.36□□□□□ -1.07
HIF3A-217ENST00000600236 IL4P05112 153 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 ZNF688P0C7X2 276 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 MIFP14174 115 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 TAS2R30P59541 319 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 NUTF2P61970 127 aaKnown RBP8.35□□□□□ -1.07
HIF3A-217ENST00000600236 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
HIF3A-217ENST00000600236 POLR2GP62487 172 aaKnown RBP eCLIP8.35□□□□□ -1.07
HIF3A-217ENST00000600236 BAXQ07812 192 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms