RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 NRN1Q9NPD7 142 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 IGLV2-18A0A075B6J9 118 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 GIPP09681 153 aaPredicted RBP13.3□□□□□ -0.28
PDE4C-208ENST00000595343 SPART-AS1P0CW21 52 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 OR10J1P30954 320 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 HTR2BP41595 481 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 EMP1P54849 157 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 SPCS3P61009 180 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 ZNF705AQ6ZN79 300 aaPredicted RBP13.3□□□□□ -0.28
PDE4C-208ENST00000595343 UBE2DNLQ8IWF7 75 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 RNASE11Q8TAA1 199 aaKnown RBP13.3□□□□□ -0.28
PDE4C-208ENST00000595343 GPR132Q9UNW8 380 aa13.3□□□□□ -0.28
PDE4C-208ENST00000595343 TMEM189A5PLL7 270 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 ZNF705FA8MVS1 300 aaPredicted RBP13.29□□□□□ -0.28
PDE4C-208ENST00000595343 IL4P05112 153 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 ZNF705DP0CH99 300 aaPredicted RBP13.29□□□□□ -0.28
PDE4C-208ENST00000595343 ZNF705BP0CI00 300 aaPredicted RBP13.29□□□□□ -0.28
PDE4C-208ENST00000595343 SLC25A4P12235 298 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 HLA-DRB4P13762 266 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 UCP1P25874 307 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 RAP2BP61225 183 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 AARDQ4LEZ3 155 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 C4orf46Q504U0 113 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 KRTAP4-5Q9BYR2 181 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 HLA-DRB4X5D2U9 266 aa13.29□□□□□ -0.28
PDE4C-208ENST00000595343 A0A0B4J2A0 478 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 BUB3O43684 328 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 CXCL3P19876 107 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 SIGLEC15Q6ZMC9 328 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 ZNF575Q86XF7 245 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 C12orf45Q8N5I9 185 aaPredicted RBP13.28□□□□□ -0.28
PDE4C-208ENST00000595343 OR52E5Q8NH55 327 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 FAM210BQ96KR6 192 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
PDE4C-208ENST00000595343 MGAT4CQ9UBM8 478 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 SHPKQ9UHJ6 478 aa13.28□□□□□ -0.28
PDE4C-208ENST00000595343 SMIM9A6NGZ8 99 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 NKX2-1P43699 371 aaPredicted RBP13.27□□□□□ -0.29
PDE4C-208ENST00000595343 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 TMED4Q7Z7H5 227 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 FAM219AQ8IW50 185 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 CCDC71LQ8N9Z2 235 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 ZBTB8BQ8NAP8 495 aaPredicted RBP13.27□□□□□ -0.29
PDE4C-208ENST00000595343 ZFAND1Q8TCF1 268 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 MARCH1Q8TCQ1 289 aa13.27□□□□□ -0.29
PDE4C-208ENST00000595343 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.29
PDE4C-208ENST00000595343 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.27□□□□□ -0.29
PDE4C-208ENST00000595343 IGHV3OR16-12A0A075B7B8 117 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 FXYD7P58549 80 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 GDF5OSQ5U4N7 250 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 MITD1Q8WV92 249 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 NPIPB3Q92617 1050 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 DKK2Q9UBU2 259 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 RFNGQ9Y644 331 aa13.26□□□□□ -0.29
PDE4C-208ENST00000595343 C9orf170A2RU37 121 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 NXPH3O95157 252 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 CDS2O95674 445 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 TOMM40O96008 361 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 IGKV3-20P01619 116 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 RD3LP0DJH9 198 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 DEFB1P60022 68 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 RNF212Q495C1 297 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 SOHLH1Q5JUK2 328 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 FAM222AQ5U5X8 452 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 SLC24A4Q8NFF2 622 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 TMEM170AQ8WVE7 144 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 NIPSNAP3BQ9BS92 247 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 TMEM222Q9H0R3 208 aa13.25□□□□□ -0.29
PDE4C-208ENST00000595343 C14orf166Q9Y224 244 aaKnown RBP13.25□□□□□ -0.29
PDE4C-208ENST00000595343 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
PDE4C-208ENST00000595343 PPP1R1AQ13522 171 aa13.24□□□□□ -0.29
PDE4C-208ENST00000595343 ETFRF1Q6IPR1 90 aa13.24□□□□□ -0.29
PDE4C-208ENST00000595343 LHFPL5Q8TAF8 219 aa13.24□□□□□ -0.29
PDE4C-208ENST00000595343 ACY3Q96HD9 319 aa13.24□□□□□ -0.29
PDE4C-208ENST00000595343 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
PDE4C-208ENST00000595343 CEBPZOSA8MTT3 80 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 OR5AC1P0C628 307 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 PSG1P11464 419 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 NKX2-5P52952 324 aaPredicted RBP13.23□□□□□ -0.29
PDE4C-208ENST00000595343 C1orf134Q5TEV5 83 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 OR51G1Q8NGK1 321 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 GLYATL2Q8WU03 294 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 RBPMSQ93062 196 aaKnown RBP13.23□□□□□ -0.29
PDE4C-208ENST00000595343 GPR146Q96CH1 333 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 SAV1Q9H4B6 383 aaPredicted RBP13.23□□□□□ -0.29
PDE4C-208ENST00000595343 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
PDE4C-208ENST00000595343 SFT2D2O95562 160 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 HTN3P15516 51 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 FOXI2Q6ZQN5 318 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 SELENOHQ8IZQ5 122 aaKnown RBP13.22□□□□□ -0.29
PDE4C-208ENST00000595343 ZNF709Q8N972 641 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 OR2T35Q8NGX2 323 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 LINC00052Q96N35 136 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 CLUHP3Q96NS8 147 aa13.22□□□□□ -0.29
PDE4C-208ENST00000595343 RTBDNQ9BSG5 229 aaPredicted RBP13.22□□□□□ -0.29
PDE4C-208ENST00000595343 NACAE9PAV3 2078 aa13.21□□□□□ -0.29
PDE4C-208ENST00000595343 TEX13DA0A0J9YY54 714 aaPredicted RBP13.21□□□□□ -0.29
PDE4C-208ENST00000595343 RGS13O14921 159 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms