RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 NKX2-1P43699 371 aaPredicted RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 CCR6P51684 374 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 EMP1P54849 157 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SUPT4H1P63272 117 aaKnown RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 ZNF90Q03938 601 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 OR2F1Q13607 317 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 KLF9Q13886 244 aaPredicted RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SMCO1Q147U7 214 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 NOXA1Q86UR1 476 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 OR1S1Q8NH92 325 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 RAB2BQ8WUD1 216 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 IL22RA2Q969J5 263 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 LINC00052Q96N35 136 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SCGB3A2Q96PL1 93 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SAV1Q9H4B6 383 aaPredicted RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SHPKQ9UHJ6 478 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 U3KQ87 197 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SMIM9A6NGZ8 99 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 PRM2P04554 102 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 ANXA3P12429 323 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 TMBIM6P55061 237 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 LYZP61626 148 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 SNRPD3P62318 126 aaKnown RBP6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 OXA1LQ15070 435 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 ZNF79Q15937 498 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 SPATA12Q7Z6I5 190 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 MCFD2Q8NI22 146 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 RNF125Q96EQ8 232 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 C20orf173Q96LM9 149 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 C1QTNF4Q9BXJ3 329 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 SLIRPQ9GZT3 109 aaKnown RBP6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 SLC35B3Q9H1N7 401 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 RABL2AQ9UBK7 228 aaPredicted RBP6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 HSPB7Q9UBY9 170 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 RABL2BQ9UNT1 228 aa6.84□□□□□ -1.31
NOTCH3-202ENST00000595045 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 A8MTW9 85 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 F6UB75 175 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 NOL3O60936 208 aaKnown RBP6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 NUTF2P61970 127 aaKnown RBP6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 GAMTQ14353 236 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 PYDC2Q56P42 97 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 TMEM88Q6PEY1 159 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 AMTNQ6UX39 209 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 C6orf223Q8N319 242 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 PPP1R14BQ96C90 147 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 SLC35E1Q96K37 410 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 SOSTQ9BQB4 213 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 NIPSNAP3BQ9BS92 247 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 RFNGQ9Y644 331 aa6.83□□□□□ -1.32
NOTCH3-202ENST00000595045 PLAC8L1A1L4L8 177 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 TMEM189A5PLL7 270 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 SNRPGP15A8MWD9 76 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 H3BMQ9 156 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 VAMP1P23763 118 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 GPX4P36969 197 aaPredicted RBP6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 PAX9P55771 341 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 FOXI2Q6ZQN5 318 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 TOMM5Q8N4H5 51 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 OR4B1Q8NGF8 309 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 MAGT1Q9H0U3 335 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 NDUFA13Q9P0J0 144 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 CACFD1Q9UGQ2 172 aa6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 YTHDF2Q9Y5A9 579 aaKnown RBP6.82□□□□□ -1.32
NOTCH3-202ENST00000595045 NBDYA0A0U1RRE5 68 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 CCDC160A6NGH7 325 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 WRBO00258 174 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 CRXO43186 299 aaPredicted RBP6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 HOXB5P09067 269 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 HTN3P15516 51 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 FAUP35544 74 aaKnown RBP6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 ID1P41134 155 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 FAM3BP58499 235 aaPredicted RBP6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 RAB11AP62491 216 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 SRPXP78539 464 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 FAM78BQ5VT40 261 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 COQ8AQ8NI60 647 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 BCL7BQ9BQE9 202 aa6.81□□□□□ -1.32
NOTCH3-202ENST00000595045 IGKV1OR2-108A0A075B7D4 117 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 A0A0J9YX75 114 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 PITX3O75364 302 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 GATA2P23769 480 aaPredicted RBP6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 PSMB3P49720 205 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 PSG9Q00887 426 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 TMEM128Q5BJH2 165 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 OR8G2PQ6IF36 304 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 OR8I2Q8N0Y5 310 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 SLC25A22Q9H936 323 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
NOTCH3-202ENST00000595045 TMED3Q9Y3Q3 217 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms