RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SMIM3Q9BZL3 60 aa14.79□□□□□ -0.04
CIRBP-220ENST00000588917 ZNF256Q9Y2P7 627 aaPredicted RBP14.79□□□□□ -0.04
CIRBP-220ENST00000588917 ELOA3CA0A087WX78 387 aaPredicted RBP14.78□□□□□ -0.04
CIRBP-220ENST00000588917 ARPC5O15511 151 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 C1orf194Q5T5A4 169 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 OR1B1Q8NGR6 318 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 GGTLC1Q9BX51 225 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 NPCDR1Q9BY65 106 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 MFFQ9GZY8 342 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 ARL6Q9H0F7 186 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 FBXL17Q9UF56 701 aa14.78□□□□□ -0.04
CIRBP-220ENST00000588917 IGHV3-49A0A0A0MS15 119 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 RNF222A6NCQ9 220 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 HELTA6NFD8 242 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 SMLR1H3BR10 107 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 BUB3O43684 328 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 APOHP02749 345 aaPredicted RBP14.77□□□□□ -0.05
CIRBP-220ENST00000588917 OPCMLQ14982 345 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 OR1L4Q8NGR5 311 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 ST8SIA2Q92186 375 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 RNF2Q99496 336 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 HIGD1AQ9Y241 93 aa14.77□□□□□ -0.05
CIRBP-220ENST00000588917 IGHV3OR16-13A0A075B7E8 117 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 IGHV3-74A0A0B4J1X5 117 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 TSPAN4O14817 238 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 OR5G3P0C626 314 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 PRR20EP86478 221 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 PRR20CP86479 221 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 PRR20DP86480 221 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 PRR20BP86481 221 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 PRR20AP86496 221 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 C16orf54Q6UWD8 224 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 STPG3Q8N7X2 389 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 PFDN5Q99471 154 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 SPAG8Q99932 426 aaPredicted RBP14.76□□□□□ -0.05
CIRBP-220ENST00000588917 DNAJC4Q9NNZ3 241 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 SLC39A9Q9NUM3 307 aa14.76□□□□□ -0.05
CIRBP-220ENST00000588917 BORCS7-ASMTA0A0B4J1R7 106 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 A0A0D9SG52 128 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 A0A1B0GVG6 124 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 COX7A2P2O60397 106 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 GP9P14770 177 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 KRTAP10-11P60412 298 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 B2MP61769 119 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 ZNF345Q14585 488 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 MIC13Q5XKP0 118 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 TCF24Q7RTU0 167 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 TMEM61Q8N0U2 210 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 WFDC1Q9HC57 220 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 PXMP4Q9Y6I8 212 aa14.75□□□□□ -0.05
CIRBP-220ENST00000588917 IGHV3-66A0A0C4DH42 116 aa14.74□□□□□ -0.05
CIRBP-220ENST00000588917 RPL11P62913 178 aaKnown RBP14.74□□□□□ -0.05
CIRBP-220ENST00000588917 GUCA2BQ16661 112 aa14.74□□□□□ -0.05
CIRBP-220ENST00000588917 FAM90A2PQ658T7 463 aa14.74□□□□□ -0.05
CIRBP-220ENST00000588917 GPR82Q96P67 336 aa14.74□□□□□ -0.05
CIRBP-220ENST00000588917 ARV1Q9H2C2 271 aa14.74□□□□□ -0.05
CIRBP-220ENST00000588917 IZUMO1RA6ND01 250 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 ZNF98A6NK75 572 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 ZNF785A8K8V0 405 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 JTBO76095 146 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 C1QBP02746 253 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 CMC4P56277 68 aaPredicted RBP14.73□□□□□ -0.05
CIRBP-220ENST00000588917 C10orf113Q5VZT2 155 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 GTSCR1Q86UQ5 136 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 OR8I2Q8N0Y5 310 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 KCNRGQ8N5I3 272 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 OR11H4Q8NGC9 324 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 GATAD1Q8WUU5 269 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 HYLS1Q96M11 299 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 SLC25A39Q9BZJ4 359 aaPredicted RBP14.73□□□□□ -0.05
CIRBP-220ENST00000588917 DOK5Q9P104 306 aa14.73□□□□□ -0.05
CIRBP-220ENST00000588917 OR4C46A6NHA9 309 aa14.72□□□□□ -0.05
CIRBP-220ENST00000588917 GLMPQ8WWB7 406 aa14.72□□□□□ -0.05
CIRBP-220ENST00000588917 SHANK2-AS3Q9BTD1 123 aa14.72□□□□□ -0.05
CIRBP-220ENST00000588917 TIMM9Q9Y5J7 89 aa14.72□□□□□ -0.05
CIRBP-220ENST00000588917 TRAV2A0A0B4J234 112 aa14.71□□□□□ -0.05
CIRBP-220ENST00000588917 DNASE2O00115 360 aaPredicted RBP14.71□□□□□ -0.05
CIRBP-220ENST00000588917 PATE2Q6UY27 113 aa14.71□□□□□ -0.05
CIRBP-220ENST00000588917 SIGLEC15Q6ZMC9 328 aa14.71□□□□□ -0.05
CIRBP-220ENST00000588917 LINC00305Q7Z4B0 112 aa14.71□□□□□ -0.05
CIRBP-220ENST00000588917 TMEM37Q8WXS4 190 aa14.71□□□□□ -0.05
CIRBP-220ENST00000588917 GNPNAT1Q96EK6 184 aaPredicted RBP14.71□□□□□ -0.05
CIRBP-220ENST00000588917 ARPC5LQ9BPX5 153 aa14.71□□□□□ -0.05
CIRBP-220ENST00000588917 H3BRN7 92 aa14.7□□□□□ -0.06
CIRBP-220ENST00000588917 GALR1P47211 349 aa14.7□□□□□ -0.06
CIRBP-220ENST00000588917 SLC25A22Q9H936 323 aa14.7□□□□□ -0.06
CIRBP-220ENST00000588917 NOTCH3Q9UM47 2321 aa14.69□□□□□ -0.06
CIRBP-220ENST00000588917 KANTRA0A1W2PQU2 76 aa14.69□□□□□ -0.06
CIRBP-220ENST00000588917 RPL7P18124 248 aaKnown RBP14.69□□□□□ -0.06
CIRBP-220ENST00000588917 SERF2P84101 59 aa14.69□□□□□ -0.06
CIRBP-220ENST00000588917 PSMG3Q9BT73 122 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-220ENST00000588917 RSG1Q9BU20 258 aa14.69□□□□□ -0.06
CIRBP-220ENST00000588917 MS4A6AQ9H2W1 248 aa14.69□□□□□ -0.06
CIRBP-220ENST00000588917 AURKAIP1Q9NWT8 199 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-220ENST00000588917 SELENOKQ9Y6D0 94 aa14.69□□□□□ -0.06
CIRBP-220ENST00000588917 IGKV3-7A0A075B6H7 116 aa14.68□□□□□ -0.06
CIRBP-220ENST00000588917 EIF5AP63241 154 aaKnown RBP14.68□□□□□ -0.06
CIRBP-220ENST00000588917 FFAR4Q5NUL3 377 aa14.68□□□□□ -0.06
CIRBP-220ENST00000588917 SAMD13Q5VXD3 122 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms