RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 PRR20BP86481 221 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 PRR20AP86496 221 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
VMP1-203ENST00000586245 TMUB2Q71RG4 321 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 RSG1Q9BU20 258 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 RHPN1-AS1Q9BWJ2 59 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
VMP1-203ENST00000586245 DOK5Q9P104 306 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 VWFP04275 2813 aa10.34□□□□□ -0.75
VMP1-203ENST00000586245 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
VMP1-203ENST00000586245 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 CHEK1O14757 476 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 BCL2L11O43521 198 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 HSD17B11Q8NBQ5 300 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 HIGD1AQ9Y241 93 aa10.33□□□□□ -0.76
VMP1-203ENST00000586245 IGHV3-66A0A0C4DH42 116 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
VMP1-203ENST00000586245 LGALSLQ3ZCW2 172 aaPredicted RBP10.32□□□□□ -0.76
VMP1-203ENST00000586245 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 OR2K2Q8NGT1 345 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 GNPNAT1Q96EK6 184 aaPredicted RBP10.32□□□□□ -0.76
VMP1-203ENST00000586245 PFDN5Q99471 154 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 ZNF471Q9BX82 626 aaPredicted RBP10.32□□□□□ -0.76
VMP1-203ENST00000586245 ARV1Q9H2C2 271 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 MLXQ9UH92 298 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 TIMM9Q9Y5J7 89 aa10.32□□□□□ -0.76
VMP1-203ENST00000586245 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 CD5P06127 495 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 C4BPBP20851 252 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 ATP6V0CP27449 155 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 EIF5AP63241 154 aaKnown RBP10.31□□□□□ -0.76
VMP1-203ENST00000586245 DEFB114Q30KQ6 69 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 C10orf113Q5VZT2 155 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 LAMTOR1Q6IAA8 161 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 ZMAT5Q9UDW3 170 aaKnown RBP10.31□□□□□ -0.76
VMP1-203ENST00000586245 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 U3KQE9 123 aa10.31□□□□□ -0.76
VMP1-203ENST00000586245 G3V4G9 280 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 WIPF1O43516 503 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 BUB3O43684 328 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 CD300EQ496F6 205 aaPredicted RBP10.3□□□□□ -0.76
VMP1-203ENST00000586245 LCN12Q6JVE5 192 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 C16orf54Q6UWD8 224 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 PATE2Q6UY27 113 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 RBPMS2Q6ZRY4 209 aaKnown RBP10.3□□□□□ -0.76
VMP1-203ENST00000586245 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 C9orf62Q8N4C0 152 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 RNF2Q99496 336 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 PSMG3Q9BT73 122 aaPredicted RBP10.3□□□□□ -0.76
VMP1-203ENST00000586245 SLC25A39Q9BZJ4 359 aaPredicted RBP10.3□□□□□ -0.76
VMP1-203ENST00000586245 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
VMP1-203ENST00000586245 TRAV25A0A0B4J276 109 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 ZNF98A6NK75 572 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 H3BRN7 92 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 NKX2-5P52952 324 aaPredicted RBP10.29□□□□□ -0.76
VMP1-203ENST00000586245 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
VMP1-203ENST00000586245 SERF2P84101 59 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
VMP1-203ENST00000586245 C1orf194Q5T5A4 169 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 SAMD5Q5TGI4 173 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 OR8I2Q8N0Y5 310 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 UHRF2Q96PU4 802 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 SHANK2-AS3Q9BTD1 123 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 SLC25A32Q9H2D1 315 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 SLC25A22Q9H936 323 aa10.29□□□□□ -0.76
VMP1-203ENST00000586245 HELTA6NFD8 242 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 MBP02144 154 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 TPT1P13693 172 aaKnown RBP10.28□□□□□ -0.76
VMP1-203ENST00000586245 M6PRP20645 277 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 PAFAH1B2P68402 229 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 GCSAMLQ5JQS6 135 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 TMEM61Q8N0U2 210 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 GLMPQ8WWB7 406 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 GPR82Q96P67 336 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 SCRT1Q9BWW7 348 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 SH3BGRL3Q9H299 93 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 RFNGQ9Y644 331 aa10.28□□□□□ -0.76
VMP1-203ENST00000586245 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 GUCA2BQ16661 112 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 LEMD1Q68G75 181 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 SIGLEC15Q6ZMC9 328 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 SLC51BQ86UW2 128 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
VMP1-203ENST00000586245 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms